DRSC/TRiP Functional Genomics Resources

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Protein Alignment iav and trpv4l.2

DIOPT Version :9

Sequence 1:NP_572353.1 Gene:iav / 31621 FlyBaseID:FBgn0086693 Length:1123 Species:Drosophila melanogaster
Sequence 2:XP_012820642.2 Gene:trpv4l.2 / 100494502 XenbaseID:XB-GENE-22066247 Length:806 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
iavNP_572353.1 ANKYR <127..>202 CDD:223738
ANK repeat 132..164 CDD:293786
ANK 173..315 CDD:238125
ANK repeat 173..203 CDD:293786
Ank_2 177..261 CDD:289560
ANK repeat 230..261 CDD:293786
Ank_2 235..324 CDD:289560
ANK 258..414 CDD:238125
ANK repeat 299..329 CDD:293786
Ion_trans 501..665 CDD:278921
trpv4l.2XP_012820642.2 TRPV 50..763 CDD:424068
ANK repeat 124..167 CDD:293786
ANK repeat 171..202 CDD:293786
ANK repeat 218..252 CDD:293786
ANK repeat 254..293 CDD:293786
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386733at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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