DRSC/TRiP Functional Genomics Resources

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Protein Alignment iav and cat1

DIOPT Version :9

Sequence 1:NP_572353.1 Gene:iav / 31621 FlyBaseID:FBgn0086693 Length:1123 Species:Drosophila melanogaster
Sequence 2:XP_031761418.1 Gene:cat1 / 100485660 XenbaseID:XB-GENE-6453137 Length:703 Species:Xenopus tropicalis


Alignment Length:629 Identity:174/629 - (27%)
Similarity:285/629 - (45%) Gaps:79/629 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 NRAEFLRWKYRDHTEVTIPIEASLSIHD-PL---------GKWED---HKACWQMQYRGALGESL 135
            :|.:.||.|               |:|: ||         |:.::   ...|:..| |||.||:.
 Frog    17 SRTDLLRLK---------------SVHEMPLFLAAKENDVGRLQELLGSNQCYSSQ-RGASGETA 65

  Fly   136 LHVLIICDSKVHTKLARVLLRVFPNLALDVMEGEEYLGASALHLSIAYSNNELVADLIEAGADIH 200
            |||....|   :.:.|..||...|:|....|..:.|.|.:|||::....|..||..||:.|||:.
 Frog    66 LHVAAGYD---NLRAAETLLTADPSLVNVPMTSQLYQGQTALHIAAVNQNMNLVRILIDKGADVS 127

  Fly   201 Q-RAIGSFFLPRDQQRANPAKSTDYEGLAYMGEYPLAWAACCANESVYNLLVDCGSDPDAQDSFG 264
            . ||.||||         ..|:|:   |.|.||:.|::||...|..:..|||:.|:|..||||:|
 Frog   128 SPRATGSFF---------SLKATN---LFYFGEHILSFAASVGNADIVKLLVEKGADVRAQDSWG 180

  Fly   265 NMILHMVVV-------CDKLDMFGYALRHPKTPAKNGIVNQTGLTPLTLACKLGRAEVFREMLEL 322
            |.:||::|:       |...|:........:.|..|.:||..|||||.||...|...:|:.:::.
 Frog   181 NTVLHILVLQPNKAMACQMFDLLTSLECGQRWPPLNQMVNHQGLTPLKLAAAEGNVMMFQYLMQK 245

  Fly   323 SAREFWRYSNITCSGYPLNALDTLLPDGRTNWN---SALFIILNGTKPEHLDMLDGGIIQRLLEE 384
            ..|:......:..:.|.:..:|        :|.   |.|.::::..|.|...:||...::.|:.|
 Frog   246 GVRKVPSMGPLYYTLYDMTEID--------SWGSPCSVLHLLVSSRKSEARKILDISPVKELVNE 302

  Fly   385 KWKTFAQNQFLKRLLILSTHLLCLSVSVYLR---PAHDGEAEDEDSEGSDASAAALLDIQSDEGD 446
            ||::|.:..||....|...:::|:|:....|   |.........|.  :....|.||.......|
 Frog   303 KWQSFGRPYFLLLGAIYVLYMICVSLCCANRRLVPITGNATSPRDI--TLLKQAPLLASYISPAD 365

  Fly   447 SGGGDYNAQTVARYCAEFATLVGVLSYVIFQQGDEIKNQGLSAFLKQLSHAPAKAIFLFSNLLIL 511
            .          .|...|..|::|.|..::.:....:..|.:|.|...:|..|...|.:..:.::|
 Frog   366 E----------LRLVGELITVIGALGMLLLEIPVLMGAQSISFFKDPVSGGPFHLILVLYSCMVL 420

  Fly   512 ACIPFRLIGDTDTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMIYSMITGDMFTFGIIYCIVL 576
            |.:..||. |:|.|...:..|:...|..:||||...::||||..||:.:|.||:..|..:..:|:
 Frog   421 ATLALRLT-DSDGEIIPMSLALVFGWCYIMFFARGFQMTGPFTVMIHKIIFGDVLRFFWLMMVVI 484

  Fly   577 CGFSQAFYFLYKGHPQVQSTMFNTYTSTWMALFQTTLGDYNYPDLNQTTYPNLSKTVFVIFMIFV 641
            .||..|.:.:::.....|..:|..|..:..:.:|..:...|.|.......|.:...|:..|.:..
 Frog   485 LGFGTALFVVFQTEDPTQMGVFYNYPMSLYSTYQLLINVINSPANYAVNLPPMYSIVYFPFTLIA 549

  Fly   642 PILLLNMLIAMMGNTYVTVIEQSEKEWMKQWAKIVVTLERAVPQ 685
            .::::||||.|||:|:..|.::.::.|..|.|.|.:.||...|:
 Frog   550 NLMMMNMLIGMMGDTHWRVAQERDELWRAQLAAITIMLEGKFPK 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
iavNP_572353.1 ANKYR <127..>202 CDD:223738 28/75 (37%)
ANK repeat 132..164 CDD:293786 11/31 (35%)
ANK 173..315 CDD:238125 56/149 (38%)
ANK repeat 173..203 CDD:293786 12/30 (40%)
Ank_2 177..261 CDD:289560 32/84 (38%)
ANK repeat 230..261 CDD:293786 12/30 (40%)
Ank_2 235..324 CDD:289560 33/95 (35%)
ANK 258..414 CDD:238125 44/165 (27%)
ANK repeat 299..329 CDD:293786 10/29 (34%)
Ion_trans 501..665 CDD:278921 46/163 (28%)
cat1XP_031761418.1 TRPV 11..620 CDD:424068 174/629 (28%)
ANK repeat 61..93 CDD:293786 11/34 (32%)
ANK repeat 100..142 CDD:293786 19/50 (38%)
ANK repeat 146..177 CDD:293786 12/30 (40%)
ANK repeat 179..209 CDD:293786 7/29 (24%)
ANK repeat 222..246 CDD:293786 9/23 (39%)
CBD_TRPV5_C <668..689 CDD:412091
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 218 1.000 Inparanoid score I3481
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386733at33208
OrthoFinder 1 1.000 - - FOG0001377
OrthoInspector 1 1.000 - - mtm9325
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X396
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.060

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