DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pod1 and coro2bb

DIOPT Version :9

Sequence 1:NP_001245554.1 Gene:pod1 / 31620 FlyBaseID:FBgn0029903 Length:1266 Species:Drosophila melanogaster
Sequence 2:XP_021326246.1 Gene:coro2bb / 796974 ZFINID:ZDB-GENE-071009-5 Length:508 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pod1NP_001245554.1 DUF1899 6..62 CDD:286094
WD40 <75..237 CDD:295369
WD40 repeat 83..127 CDD:293791
WD40 repeat 132..166 CDD:293791
WD40 repeat 174..210 CDD:293791
WD40 repeat 217..260 CDD:293791
WD40 repeat 267..294 CDD:293791
WD40_4 341..384 CDD:292916
DUF1899 808..866 CDD:286094
WD40 843..1116 CDD:295369
WD40 repeat 884..923 CDD:293791
WD40 repeat 937..973 CDD:293791
WD40 repeat 979..1016 CDD:293791
WD40 repeat 1024..1064 CDD:293791
WD40 repeat 1071..1094 CDD:293791
WD40_4 1146..1189 CDD:292916
coro2bbXP_021326246.1 WD40_4 40..451 CDD:330497
WD40 repeat 69..110 CDD:293791
WD40 repeat 116..160 CDD:293791
WD40 repeat 165..202 CDD:293791
WD40 repeat 209..244 CDD:293791
WD40 repeat 250..291 CDD:293791
WD40 repeat 299..339 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D179930at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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