DRSC/TRiP Functional Genomics Resources

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Protein Alignment pod1 and coro7

DIOPT Version :9

Sequence 1:NP_001245554.1 Gene:pod1 / 31620 FlyBaseID:FBgn0029903 Length:1266 Species:Drosophila melanogaster
Sequence 2:NP_001025407.1 Gene:coro7 / 569563 ZFINID:ZDB-GENE-050706-137 Length:923 Species:Danio rerio


Alignment Length:1270 Identity:408/1270 - (32%)
Similarity:590/1270 - (46%) Gaps:356/1270 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RFKASKYKNAAPIVPKAEACVREICVGSYQTYGNNIAASGAFMAFNWEHTGSSVAVLPLDDCGRK 68
            |||.|||||..|.:||.:..:..:..||:.:.|.:|..|.:.:|||.:|.|..:..|...:.|..
Zfish     3 RFKTSKYKNTTPKIPKKDGWIANVRGGSFSSQGKHIKPSCSLVAFNTDHAGGGMLGLSSVNAGAD 67

  Fly    69 SK-TMPLLHGHTDTVTDLKFSPFHDGLLATASQDCLVKIWHIPEKGLEQSLSDPEAIFSHKQRRV 132
            .| ::..:..|.|.||||.||||.|.||||.|.|..||:|.:.:...:|. |:.|...|....|:
Zfish    68 GKWSVTQISCHADLVTDLDFSPFDDYLLATCSADQTVKLWRLWDVDQDQP-SNAEVTLSPADGRL 131

  Fly   133 ETVGFHPTADGLMYSTAAGCVALFDLSTQKEIFSNNEHPEVIQSASWREDGSVLATSCKDKNVRI 197
            |.:.|||.|..|:...:||.|.|:|::....:.....|.:.:|..||:||||:||:|||||.:|:
Zfish   132 ELLLFHPAASALLAVASAGGVQLWDINRDSALTVLEPHADQLQGLSWKEDGSLLASSCKDKKLRL 196

  Fly   198 FDPRAAGSPIQLTAESHQSIKDSRVVWLGNQHRILTTGFDAARLRQVIIRDVRNFNTPEKTLELD 262
            |||||..|.:| ..::||..:||||:|:.:.: :|||||:..|.::|.:.|.|...:....|.|.
Zfish   197 FDPRAQPSAVQ-CVQAHQGNRDSRVLWVKDDN-LLTTGFNQVRQQEVRLWDSRKLTSSVSALSLA 259

  Fly   263 CSTGILMPLFDPDTNMLFLAGKGDTTINYLEITDKDPYLIEGLRHTGE-QTKGACLVPKRALKVM 326
            .|...|:||||.|:.:|.|:|.|::.|:..|:...:|:|.:..:...: .::|.||:||.||.:.
Zfish   260 TSNSTLIPLFDSDSGLLILSGNGESVIDCFEVNTSEPFLSQVSQCVADSSSRGVCLLPKLALDIS 324

  Fly   327 EAEVNRVLQLTSNMVIPIMYQVPRKTYRDFHADLYPETTGYKTELVAGEWLNGSNQAVPKMSLDP 391
            ..||.|::|||.|.::||.||||||..:||||||||:|.|:...:.|.||..|.|:.|.::||.|
Zfish   325 CCEVLRLMQLTENFIVPISYQVPRKAGQDFHADLYPDTVGHTAAMSADEWWKGDNKQVERVSLHP 389

  Fly   392 AKREHGDEPIIIHRGNLSDFVKNLENQRAKSNTTGKPNQQAKRNDNEHFVMLNTGNNFEEKNGND 456
            :||                                                              
Zfish   390 SKR-------------------------------------------------------------- 392

  Fly   457 NSNESNGKKSTPSQSQPDGECSELIRKFEAKYKVDSEKEKAHAYAQSHEDDKESPTEHEHSTGSS 521
                       |..:.|                  |.:|||               :.:.|.|.|
Zfish   393 -----------PKPAAP------------------SAQEKA---------------QKDISRGKS 413

  Fly   522 EEVSSSGGLDNHSASGSHSPPKPMPRTSRSNSLPEASDSAGESSSTNTPRPRPRTTAASAYKPRL 586
            :|                                       |:||:::|...|.::|..:..|  
Zfish   414 KE---------------------------------------EASSSSSPLSSPSSSAVPSRSP-- 437

  Fly   587 GPKPFSSTTGDVSFDKVFAVPLAPGSHENISNVGQDSGVEMTPAQGAKPDLIVEIEIKKKHEREP 651
                 |||:                        |..||...:|:                     
Zfish   438 -----SSTS------------------------GLSSGFVPSPS--------------------- 452

  Fly   652 AVSGNGVQKSLTTSERRKSSADDDESSDKIFEQNSESSENSTEGEDRTDADLRRNCTSRSSFAER 716
                                                                             
Zfish   453 ----------------------------------------------------------------- 452

  Fly   717 RRIYENRSKSQVDEKPQSPVPLRREHSKVEPLKPNQQQQQQGNVIDTKRISVPEGKLMEEHRRGN 781
                                             |:|                             
Zfish   453 ---------------------------------PSQ----------------------------- 455

  Fly   782 GAGLKKSATEAAFSAASTKRTSTVFGKVSKFRHLKGTPGHKSTHIENLRNLSRQIPGECNGFHAN 846
                            |::....:.|..|||||::|:..|:.|||.|||.|....||||:||.||
Zfish   456 ----------------SSRAIHNMLGPSSKFRHIQGSVLHRDTHITNLRGLHLTTPGECDGFCAN 504

  Fly   847 QERVAVPLSGPGGKIAIFELSRPGRLPDGVIPSLVNGSNIMDFQWDPFDAQRLAVACDDGIVKIW 911
            .:|||||.:..||:||:||||:||:|||..:|::.|..|:.||.|||||..||.||.||..:::|
Zfish   505 GQRVAVPQAIAGGQIAVFELSQPGKLPDTALPTIQNSVNVADFCWDPFDPHRLVVAGDDAKIRVW 569

  Fly   912 HIEAGGLSEPTNTPAGELTAHLDKIYFIRFHPLAADVLLTASYDMTIKLWDLRTMTEKCSLSGHT 976
            .|..|||.|....|...|..|.:|||.::|||.|..:|:::|||:|::||.|:|..:...||||.
Zfish   570 QIPKGGLQETLTEPECVLRGHTEKIYSVKFHPHAIGLLVSSSYDLTVRLWSLKTGEQVKQLSGHQ 634

  Fly   977 DQIFDFAWSPCGRLGATVCKDGKIRVYNPRKSETPIREGNGPVGTRGARITWALEGHYIVCTGFD 1041
            ||||..||||.|:|.||||||||:|:|:||||.:||:||.||.|.||||:.|...|.:::.:|||
Zfish   635 DQIFGMAWSPDGKLLATVCKDGKVRLYDPRKSTSPIQEGPGPEGQRGARVVWVCGGKFLMVSGFD 699

  Fly  1042 KVSERQISVYNAQKL-SAPLNTASLDVSPSILIPFYDEDSSTLFVTGKGDSTIYCYEITDEEPYI 1105
            ..||||:.:::|:.| |..|.:|..|||||.||||||.|:|.|.:|||||:.::.|||..|.||.
Zfish   700 SRSERQLYLFSAESLASGSLASAPADVSPSTLIPFYDPDTSVLILTGKGDTRVFIYEIVPEAPYF 764

  Fly  1106 CPLSHHRCTSLHQGLSFLTKNHCDVASVEFSKAYRLTNTTIEPLSFTVPRIKSELFQDDLFPPTR 1170
            ...|....:..|:||.||.|..|||..||.::|.||..|||||::|.|||:|.|.||||:||.|.
Zfish   765 MECSSFNSSEPHKGLCFLPKTECDVRDVEVARAVRLGKTTIEPVAFRVPRVKKEFFQDDVFPDTA 829

  Fly  1171 ITWSATLSSEDWFASNDKAAPKVSLKPEGMETLSSIQQVPAQ-PVKK--PDHPQFGGQKSEYEIN 1232
            :.|.::||:.||.:.:|....|:||:|:.|   :.:.:.|.: ||:|  |.......:..|   .
Zfish   830 VWWESSLSAADWLSGSDGQHRKISLRPKDM---TPVSEAPKEAPVRKYLPSSVYLEEKTDE---Q 888

  Fly  1233 KQQEIQKSVSARM-EFTTKLEQDDMEGVDENEWQE 1266
            |::|:..::.|:: .....|.|:..|||||:||.:
Zfish   889 KKEELLSAMVAKLGNREDPLPQESYEGVDEDEWDD 923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pod1NP_001245554.1 DUF1899 6..62 CDD:286094 20/55 (36%)
WD40 <75..237 CDD:295369 70/161 (43%)
WD40 repeat 83..127 CDD:293791 20/43 (47%)
WD40 repeat 132..166 CDD:293791 11/33 (33%)
WD40 repeat 174..210 CDD:293791 22/35 (63%)
WD40 repeat 217..260 CDD:293791 14/42 (33%)
WD40 repeat 267..294 CDD:293791 11/26 (42%)
WD40_4 341..384 CDD:292916 23/42 (55%)
DUF1899 808..866 CDD:286094 32/57 (56%)
WD40 843..1116 CDD:295369 141/273 (52%)
WD40 repeat 884..923 CDD:293791 20/38 (53%)
WD40 repeat 937..973 CDD:293791 14/35 (40%)
WD40 repeat 979..1016 CDD:293791 25/36 (69%)
WD40 repeat 1024..1064 CDD:293791 15/40 (38%)
WD40 repeat 1071..1094 CDD:293791 14/22 (64%)
WD40_4 1146..1189 CDD:292916 22/42 (52%)
coro7NP_001025407.1 DUF1899 5..55 CDD:286094 19/49 (39%)
WD40 repeat 42..77 CDD:293791 8/34 (24%)
WD40 71..>288 CDD:295369 89/219 (41%)
WD40 repeat 83..126 CDD:293791 20/43 (47%)
WD40 repeat 131..167 CDD:293791 11/35 (31%)
WD40 repeat 174..210 CDD:293791 22/36 (61%)
WD40 repeat 217..257 CDD:293791 14/40 (35%)
WD40 repeat 265..305 CDD:293791 14/39 (36%)
WD40_4 339..382 CDD:292916 23/42 (55%)
DUF1899 467..524 CDD:286094 32/56 (57%)
WD40 repeat 501..537 CDD:293791 21/35 (60%)
WD40 repeat 542..581 CDD:293791 20/38 (53%)
WD40 <547..723 CDD:295369 89/175 (51%)
WD40 repeat 595..631 CDD:293791 14/35 (40%)
WD40 repeat 637..674 CDD:293791 25/36 (69%)
WD40 repeat 717..768 CDD:293791 27/50 (54%)
WD40_4 805..848 CDD:292916 22/42 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594180
Domainoid 1 1.000 145 1.000 Domainoid score I4526
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11573
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55469
OrthoDB 1 1.010 - - D179930at33208
OrthoFinder 1 1.000 - - FOG0004080
OrthoInspector 1 1.000 - - otm24266
orthoMCL 1 0.900 - - OOG6_105739
Panther 1 1.100 - - LDO PTHR10856
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4043
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.860

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