Sequence 1: | NP_001245554.1 | Gene: | pod1 / 31620 | FlyBaseID: | FBgn0029903 | Length: | 1266 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017211752.2 | Gene: | coro1cb / 562849 | ZFINID: | ZDB-GENE-030131-418 | Length: | 1392 | Species: | Danio rerio |
Alignment Length: | 1299 | Identity: | 311/1299 - (23%) |
---|---|---|---|
Similarity: | 509/1299 - (39%) | Gaps: | 303/1299 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 156 FDLSTQKEIFSNNEHPEVIQSASWREDGSVLATSCKDKNVRIFDPRAAGSPIQLTAESHQSIKDS 220
Fly 221 -RVVWLGNQHRILTTGFD----AARLRQVII---------RDVRNFNTPEKTLELDCSTGILMPL 271
Fly 272 FDPDTNMLFLAGKGDTTINYLEITDKD-------------PYL------------IEG---LRHT 308
Fly 309 --GEQTKGACLVPKRALKVMEAEVNRVLQL----TSNMVIPIMYQVPRKTYRDFHADLYPETTGY 367
Fly 368 KTE-----------------LVAGEWLNGSNQAVPKMSLDPAKREHG----DEPIIIHRGNLSDF 411
Fly 412 VKNLENQRA--KSNTTGKPNQQAKRNDNEHFVMLNTGNNFEEKNGN------------------- 455
Fly 456 -DNSNE------SNGK-------KSTPSQSQPDGECSELIRKFEAKYKVDSEKEKAH-------- 498
Fly 499 --AYAQSHEDDKESPTEHEHSTGSSEEVSSSGGLDNHSASGS--HSPPKPMPRTSRSNSLPEASD 559
Fly 560 SAGESSSTNTPRPRP------------RTTAA-------SAYKPRLGPKPF----------SSTT 595
Fly 596 GDVSFDKVFAVP---LAPGSHENISNVGQDSGVEMTPAQGAKPDLIVEIEIKKKHERE------P 651
Fly 652 AVSGNGVQKSLTTSERRKSSADDD-ESSDKIFEQNSESSEN-STEGEDRTD----ADLRRNCTSR 710
Fly 711 SSFAERRRIYENRSKSQVDEKPQSPVPLRREHSKVEPLKPNQQQQQQGNVIDTKRISVPEGKLME 775
Fly 776 EHRRGNGAG---LKKSATEAAFSAAST-----KRTS---TVFGKV---SKFRHLKGTPGHKSTHI 826
Fly 827 ENLRNLSRQIPGECNGFHANQERVA--VPLSGPGGKIAIFELSRPGRLPDGVIPSLVNGSN-IMD 888
Fly 889 FQWDPFDAQRLAVACDDGIVKIWHIEAGGLSEPTNTPAGELTAHLDKIYFIRFHPLAADVLLTAS 953
Fly 954 YDMTIKLWDLRTMTEKCSLSG-HTDQIFDFAWSPCGRLGATVCKDGKIRVYNPRKSETPIREGNG 1017
Fly 1018 PVGTRGARITWALEGHYIVCTGFDKVSERQISVYNAQKLSAPLNTASLDVSPSILIPFYDEDSST 1082
Fly 1083 LFVTGKGDSTIYCYEITDEEPYICPLSHHRCTSLHQGLSFLTKNHCDVASVEFSKAYRLTNTTIE 1147
Fly 1148 PLSFTVPRIKSELFQDDLFPPTRITWSATLSSEDWFASNDKAAPKVSLK----PEGMETLSSIQ- 1207
Fly 1208 -----------QVPAQPVKKPDHPQFGGQKSEYEINKQQEIQKSVSARMEFTT-------KLEQ 1253 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pod1 | NP_001245554.1 | DUF1899 | 6..62 | CDD:286094 | |
WD40 | <75..237 | CDD:295369 | 19/81 (23%) | ||
WD40 repeat | 83..127 | CDD:293791 | |||
WD40 repeat | 132..166 | CDD:293791 | 3/9 (33%) | ||
WD40 repeat | 174..210 | CDD:293791 | 7/35 (20%) | ||
WD40 repeat | 217..260 | CDD:293791 | 11/56 (20%) | ||
WD40 repeat | 267..294 | CDD:293791 | 7/26 (27%) | ||
WD40_4 | 341..384 | CDD:292916 | 11/59 (19%) | ||
DUF1899 | 808..866 | CDD:286094 | 18/62 (29%) | ||
WD40 | 843..1116 | CDD:295369 | 91/276 (33%) | ||
WD40 repeat | 884..923 | CDD:293791 | 10/39 (26%) | ||
WD40 repeat | 937..973 | CDD:293791 | 11/35 (31%) | ||
WD40 repeat | 979..1016 | CDD:293791 | 16/36 (44%) | ||
WD40 repeat | 1024..1064 | CDD:293791 | 11/39 (28%) | ||
WD40 repeat | 1071..1094 | CDD:293791 | 11/22 (50%) | ||
WD40_4 | 1146..1189 | CDD:292916 | 20/42 (48%) | ||
coro1cb | XP_017211752.2 | WD40_4 | 927..1389 | CDD:330497 | 147/471 (31%) |
WD40 repeat | 955..997 | CDD:293791 | 13/43 (30%) | ||
WD40 repeat | 1003..1047 | CDD:293791 | 12/43 (28%) | ||
WD40 repeat | 1052..1089 | CDD:293791 | 11/36 (31%) | ||
WD40 repeat | 1097..1132 | CDD:293791 | 15/34 (44%) | ||
WD40 repeat | 1140..1180 | CDD:293791 | 11/40 (28%) | ||
WD40 repeat | 1187..1228 | CDD:293791 | 20/40 (50%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D179930at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |