| Sequence 1: | NP_001245554.1 | Gene: | pod1 / 31620 | FlyBaseID: | FBgn0029903 | Length: | 1266 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001103177.1 | Gene: | coro1b / 560168 | ZFINID: | ZDB-GENE-040123-3 | Length: | 499 | Species: | Danio rerio |
| Alignment Length: | 401 | Identity: | 144/401 - (35%) |
|---|---|---|---|
| Similarity: | 228/401 - (56%) | Gaps: | 19/401 - (4%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 6 KASKYKNAAPIVPKAEACVREICVGSYQTYGNNIAASGAFMAFNWE-HTGSSVAVLPLDDCGRKS 69
Fly 70 KTMPLLHGHTDTVTDLKFSPFHDGLLATASQDCLVKIWHIPEKGLEQSLSDPEAIFSHKQRRVET 134
Fly 135 VGFHPTADGLMYSTAAGC---VALFDLSTQKEIFS-NNEHPEVIQSASWREDGSVLATSCKDKNV 195
Fly 196 RIFDPRAAGSPIQLTAESHQSIKDSRVVWLGNQHRILTTGFDAARLRQVIIRDVRNFNTPEKTLE 260
Fly 261 LDCSTGILMPLFDPDTNMLFLAGKGDTTINYLEITDKDPYL-IEGLRHTGEQTKGACLVPKRALK 324
Fly 325 VMEAEVNRVLQLTSNMVIPIMYQVPRKTYRD-FHADLYPETTGYKTELVAGEWLNGSNQAVPKMS 388
Fly 389 LD------PAK 393 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| pod1 | NP_001245554.1 | DUF1899 | 6..62 | CDD:286094 | 16/56 (29%) |
| WD40 | <75..237 | CDD:295369 | 58/165 (35%) | ||
| WD40 repeat | 83..127 | CDD:293791 | 17/43 (40%) | ||
| WD40 repeat | 132..166 | CDD:293791 | 9/36 (25%) | ||
| WD40 repeat | 174..210 | CDD:293791 | 17/35 (49%) | ||
| WD40 repeat | 217..260 | CDD:293791 | 15/42 (36%) | ||
| WD40 repeat | 267..294 | CDD:293791 | 16/26 (62%) | ||
| WD40_4 | 341..384 | CDD:292916 | 19/43 (44%) | ||
| DUF1899 | 808..866 | CDD:286094 | |||
| WD40 | 843..1116 | CDD:295369 | |||
| WD40 repeat | 884..923 | CDD:293791 | |||
| WD40 repeat | 937..973 | CDD:293791 | |||
| WD40 repeat | 979..1016 | CDD:293791 | |||
| WD40 repeat | 1024..1064 | CDD:293791 | |||
| WD40 repeat | 1071..1094 | CDD:293791 | |||
| WD40_4 | 1146..1189 | CDD:292916 | |||
| coro1b | NP_001103177.1 | DUF1899 | 9..66 | CDD:286094 | 16/56 (29%) |
| WD40 repeat | 42..81 | CDD:293791 | 13/38 (34%) | ||
| WD40 | 78..303 | CDD:295369 | 88/228 (39%) | ||
| WD40 repeat | 87..131 | CDD:293791 | 17/43 (40%) | ||
| WD40 repeat | 136..173 | CDD:293791 | 9/38 (24%) | ||
| WD40 repeat | 181..216 | CDD:293791 | 16/35 (46%) | ||
| WD40 repeat | 224..264 | CDD:293791 | 15/40 (38%) | ||
| WD40 repeat | 271..312 | CDD:293791 | 22/40 (55%) | ||
| WD40 repeat | 319..349 | CDD:293791 | 9/29 (31%) | ||
| WD40_4 | 346..388 | CDD:292916 | 19/43 (44%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D179930at33208 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.920 | |||||