| Sequence 1: | NP_001245554.1 | Gene: | pod1 / 31620 | FlyBaseID: | FBgn0029903 | Length: | 1266 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_012814523.1 | Gene: | coro2b / 549719 | XenbaseID: | XB-GENE-1014762 | Length: | 494 | Species: | Xenopus tropicalis |
| Alignment Length: | 437 | Identity: | 154/437 - (35%) |
|---|---|---|---|
| Similarity: | 236/437 - (54%) | Gaps: | 33/437 - (7%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MAWR--FKASKYKNAAPIVPKAEACVREICVGSYQTYGNN--IAASGAFMAFNWEHT-GSSVAVL 60
Fly 61 PLDDCGRKSKTMPLLHGHTDTVTDLKFSPFHDGLLATASQDCLVKIWHIPEKGLEQSLSDPEAI- 124
Fly 125 --FSHKQRRVETVGFHPTADGLMYSTAAGC---VALFDLSTQKEIFSNNEHPEVIQSASWREDGS 184
Fly 185 VLATSCKDKNVRIFDPRAAGSPIQLTA-ESHQSIKDSRVVWLGNQHRILTTGFDAARLRQVIIRD 248
Fly 249 VRNFNTPEKTLELDCSTGILMPLFDPDTNMLFLAGKGDTTINYLEITDKDPYL--IEGLRHTGEQ 311
Fly 312 TKGACLVPKRALKVMEAEVNRVLQLTS--NMVIPIMYQVPRKTYRDFHADLYPETTGYKTELVAG 374
Fly 375 EWLNGSNQAVPKMSLDPAKREHGDEPIIIHRGNLSDFVKN----LEN 417 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| pod1 | NP_001245554.1 | DUF1899 | 6..62 | CDD:286094 | 15/58 (26%) |
| WD40 | <75..237 | CDD:295369 | 65/168 (39%) | ||
| WD40 repeat | 83..127 | CDD:293791 | 17/46 (37%) | ||
| WD40 repeat | 132..166 | CDD:293791 | 9/36 (25%) | ||
| WD40 repeat | 174..210 | CDD:293791 | 17/35 (49%) | ||
| WD40 repeat | 217..260 | CDD:293791 | 14/42 (33%) | ||
| WD40 repeat | 267..294 | CDD:293791 | 15/26 (58%) | ||
| WD40_4 | 341..384 | CDD:292916 | 16/42 (38%) | ||
| DUF1899 | 808..866 | CDD:286094 | |||
| WD40 | 843..1116 | CDD:295369 | |||
| WD40 repeat | 884..923 | CDD:293791 | |||
| WD40 repeat | 937..973 | CDD:293791 | |||
| WD40 repeat | 979..1016 | CDD:293791 | |||
| WD40 repeat | 1024..1064 | CDD:293791 | |||
| WD40 repeat | 1071..1094 | CDD:293791 | |||
| WD40_4 | 1146..1189 | CDD:292916 | |||
| coro2b | XP_012814523.1 | DUF1899 | 27..84 | CDD:286094 | 15/58 (26%) |
| PTZ00421 | 29..488 | CDD:173611 | 151/428 (35%) | ||
| WD40 repeat | 59..99 | CDD:293791 | 12/39 (31%) | ||
| WD40 | 99..>323 | CDD:295369 | 93/232 (40%) | ||
| WD40 repeat | 105..149 | CDD:293791 | 17/45 (38%) | ||
| WD40 repeat | 154..191 | CDD:293791 | 9/38 (24%) | ||
| WD40 repeat | 198..233 | CDD:293791 | 16/35 (46%) | ||
| WD40 repeat | 239..280 | CDD:293791 | 13/40 (33%) | ||
| WD40 repeat | 287..326 | CDD:293791 | 21/38 (55%) | ||
| WD40_4 | 364..406 | CDD:292916 | 16/42 (38%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D179930at33208 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.920 | |||||