Sequence 1: | NP_001245554.1 | Gene: | pod1 / 31620 | FlyBaseID: | FBgn0029903 | Length: | 1266 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_035909.2 | Gene: | Coro1c / 23790 | MGIID: | 1345964 | Length: | 474 | Species: | Mus musculus |
Alignment Length: | 460 | Identity: | 150/460 - (32%) |
---|---|---|---|
Similarity: | 241/460 - (52%) | Gaps: | 51/460 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 KASKYKNAAPIVPKAEACVREICVGSYQTYGNNIAASGAFMAFNWEHT-GSSVAVLPLDDCGRKS 69
Fly 70 KTMPLLHGHTDTVTDLKFSPFHDGLLATASQDCLVKIWHIPEKGLEQSLSDPEAIFSHKQRRVET 134
Fly 135 VGFHPTADGLMYSTAAGC---VALFDLSTQKEIFS-NNEHPEVIQSASWREDGSVLATSCKDKNV 195
Fly 196 RIFDPRAAGSPIQLTAE---SHQSIKDSRVVWL--GNQHRILTTGFDAARLRQVIIRDVRNFNTP 255
Fly 256 EKTLELDCSTGILMPLFDPDTNMLFLAGKGDTTINYLEITDKDPYLIEGLRH------TGEQTKG 314
Fly 315 ACLVPKRALKVMEAEVNRVLQLTSNMVIPIMYQVPRKTYRD-FHADLYPETTGYKTELVAGEWLN 378
Fly 379 GSNQAVPKMSLDPAKREHGDEP-----IIIHRGNLSDFVKNLENQRA-------KSNTTGKPNQQ 431
Fly 432 AKRND 436 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pod1 | NP_001245554.1 | DUF1899 | 6..62 | CDD:286094 | 13/56 (23%) |
WD40 | <75..237 | CDD:295369 | 59/170 (35%) | ||
WD40 repeat | 83..127 | CDD:293791 | 18/43 (42%) | ||
WD40 repeat | 132..166 | CDD:293791 | 11/36 (31%) | ||
WD40 repeat | 174..210 | CDD:293791 | 14/35 (40%) | ||
WD40 repeat | 217..260 | CDD:293791 | 12/44 (27%) | ||
WD40 repeat | 267..294 | CDD:293791 | 13/26 (50%) | ||
WD40_4 | 341..384 | CDD:292916 | 20/43 (47%) | ||
DUF1899 | 808..866 | CDD:286094 | |||
WD40 | 843..1116 | CDD:295369 | |||
WD40 repeat | 884..923 | CDD:293791 | |||
WD40 repeat | 937..973 | CDD:293791 | |||
WD40 repeat | 979..1016 | CDD:293791 | |||
WD40 repeat | 1024..1064 | CDD:293791 | |||
WD40 repeat | 1071..1094 | CDD:293791 | |||
WD40_4 | 1146..1189 | CDD:292916 | |||
Coro1c | NP_035909.2 | DUF1899 | 6..63 | CDD:286094 | 13/56 (23%) |
PTZ00421 | 8..471 | CDD:173611 | 150/458 (33%) | ||
WD40 repeat | 36..78 | CDD:293791 | 13/41 (32%) | ||
WD40 | 75..300 | CDD:295369 | 85/233 (36%) | ||
WD 1 | 78..118 | 18/39 (46%) | |||
WD40 repeat | 84..128 | CDD:293791 | 18/43 (42%) | ||
WD 2 | 128..168 | 12/41 (29%) | |||
WD40 repeat | 133..170 | CDD:293791 | 11/38 (29%) | ||
WD 3 | 172..202 | 12/29 (41%) | |||
WD40 repeat | 178..213 | CDD:293791 | 15/38 (39%) | ||
WD 4 | 215..249 | 11/36 (31%) | |||
WD40 repeat | 221..260 | CDD:293791 | 12/41 (29%) | ||
WD 5 | 263..303 | 22/44 (50%) | |||
WD40 repeat | 268..309 | CDD:293791 | 20/45 (44%) | ||
WD40_4 | 343..385 | CDD:292916 | 20/43 (47%) | ||
Mt_ATP-synt_D | <429..>474 | CDD:283519 | 3/15 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D179930at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |