| Sequence 1: | NP_001245554.1 | Gene: | pod1 / 31620 | FlyBaseID: | FBgn0029903 | Length: | 1266 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006511157.3 | Gene: | Coro2b / 235431 | MGIID: | 2444283 | Length: | 500 | Species: | Mus musculus |
| Alignment Length: | 400 | Identity: | 139/400 - (34%) |
|---|---|---|---|
| Similarity: | 219/400 - (54%) | Gaps: | 19/400 - (4%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MAWR--FKASKYKNAAPIVPKAEACVREICVGSYQTYGNNIAASGA-FMAFNWEHT-GSSVAVLP 61
Fly 62 LDDCGRKSKTMPLLHGHTDTVTDLKFSPFHDGLLATASQDCLVKIWHIPEKGLEQSLSDPEAIFS 126
Fly 127 HKQRRVETVGFHPTADGLMYSTAAGC---VALFDLSTQKEIFSNNEHPEVIQSASWREDGSVLAT 188
Fly 189 SCKDKNVRIFDPRAAGSPIQLTAESHQSIKDSRVVWLGNQHRILTTGFDAARLRQVIIRDVRNFN 253
Fly 254 TPEKTLELDCSTGILMPLFDPDTNMLFLAGKGDTTINYLEITDKDPYL--IEGLRHTGEQTKGAC 316
Fly 317 LVPKRALKVMEAEVNRVLQLTS--NMVIPIMYQVPRKTYRDFHADLYPETTGYKTELVAGEWLNG 379
Fly 380 SNQAVPKMSL 389 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| pod1 | NP_001245554.1 | DUF1899 | 6..62 | CDD:286094 | 15/57 (26%) |
| WD40 | <75..237 | CDD:295369 | 58/164 (35%) | ||
| WD40 repeat | 83..127 | CDD:293791 | 15/43 (35%) | ||
| WD40 repeat | 132..166 | CDD:293791 | 10/36 (28%) | ||
| WD40 repeat | 174..210 | CDD:293791 | 14/35 (40%) | ||
| WD40 repeat | 217..260 | CDD:293791 | 15/42 (36%) | ||
| WD40 repeat | 267..294 | CDD:293791 | 15/26 (58%) | ||
| WD40_4 | 341..384 | CDD:292916 | 16/42 (38%) | ||
| DUF1899 | 808..866 | CDD:286094 | |||
| WD40 | 843..1116 | CDD:295369 | |||
| WD40 repeat | 884..923 | CDD:293791 | |||
| WD40 repeat | 937..973 | CDD:293791 | |||
| WD40 repeat | 979..1016 | CDD:293791 | |||
| WD40 repeat | 1024..1064 | CDD:293791 | |||
| WD40 repeat | 1071..1094 | CDD:293791 | |||
| WD40_4 | 1146..1189 | CDD:292916 | |||
| Coro2b | XP_006511157.3 | WD40 | 35..480 | CDD:392136 | 135/390 (35%) |
| WD40 repeat | 65..105 | CDD:293791 | 13/39 (33%) | ||
| WD40 repeat | 111..155 | CDD:293791 | 15/43 (35%) | ||
| WD40 repeat | 160..197 | CDD:293791 | 10/38 (26%) | ||
| WD40 repeat | 204..239 | CDD:293791 | 13/34 (38%) | ||
| WD40 repeat | 245..282 | CDD:293791 | 14/36 (39%) | ||
| WD40 repeat | 290..332 | CDD:293791 | 21/41 (51%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D179930at33208 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.920 | |||||