| Sequence 1: | NP_001245554.1 | Gene: | pod1 / 31620 | FlyBaseID: | FBgn0029903 | Length: | 1266 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006533001.1 | Gene: | Coro6 / 216961 | MGIID: | 2183448 | Length: | 472 | Species: | Mus musculus |
| Alignment Length: | 451 | Identity: | 143/451 - (31%) |
|---|---|---|---|
| Similarity: | 234/451 - (51%) | Gaps: | 49/451 - (10%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 6 KASKYKNAAPIVPKAEACVREICVGSYQTYGNNIAASGAFMAFNWEHT--------GSSVAVLPL 62
Fly 63 DDCGRKSKTMPLLHGHTDTVTDLKFSPFHDGLLATASQDCLVKIWHIPEKGLEQSLSDPEAIFSH 127
Fly 128 KQRRVETVGFHPTADGLMYSTAA-GCVALFDLSTQKEIFSNNE-HPEVIQSASWREDGSVLATSC 190
Fly 191 KDKNVRIFDPRAAGSPIQLTAE---SHQSIKDSRVVWLGNQHRILTTGFDAARLRQVIIRDVRNF 252
Fly 253 NTPEKTLELDCSTGILMPLFDPDTNMLFLAGKGDTTINYLEITDKDPYLIEGLRH------TGEQ 311
Fly 312 TKGACLVPKRALKVMEAEVNRVLQLTSNMVIPIMYQVPRKTYRD-FHADLYPETTGYKTELVAGE 375
Fly 376 WLNGSNQAVPKMSL-----DPAKREHGDEPIIIHRGNLSDFVKNLENQRAKSNTTGKPNQQ 431 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| pod1 | NP_001245554.1 | DUF1899 | 6..62 | CDD:286094 | 13/63 (21%) |
| WD40 | <75..237 | CDD:295369 | 54/166 (33%) | ||
| WD40 repeat | 83..127 | CDD:293791 | 12/43 (28%) | ||
| WD40 repeat | 132..166 | CDD:293791 | 7/34 (21%) | ||
| WD40 repeat | 174..210 | CDD:293791 | 18/35 (51%) | ||
| WD40 repeat | 217..260 | CDD:293791 | 12/42 (29%) | ||
| WD40 repeat | 267..294 | CDD:293791 | 12/26 (46%) | ||
| WD40_4 | 341..384 | CDD:292916 | 20/43 (47%) | ||
| DUF1899 | 808..866 | CDD:286094 | |||
| WD40 | 843..1116 | CDD:295369 | |||
| WD40 repeat | 884..923 | CDD:293791 | |||
| WD40 repeat | 937..973 | CDD:293791 | |||
| WD40 repeat | 979..1016 | CDD:293791 | |||
| WD40 repeat | 1024..1064 | CDD:293791 | |||
| WD40 repeat | 1071..1094 | CDD:293791 | |||
| WD40_4 | 1146..1189 | CDD:292916 | |||
| Coro6 | XP_006533001.1 | WD40 | 9..466 | CDD:392136 | 143/449 (32%) |
| WD40 repeat | 37..79 | CDD:293791 | 14/41 (34%) | ||
| WD40 repeat | 85..129 | CDD:293791 | 12/43 (28%) | ||
| WD40 repeat | 134..171 | CDD:293791 | 8/36 (22%) | ||
| WD40 repeat | 179..215 | CDD:293791 | 19/39 (49%) | ||
| WD40 repeat | 222..262 | CDD:293791 | 12/40 (30%) | ||
| WD40 repeat | 269..310 | CDD:293791 | 17/45 (38%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D179930at33208 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.920 | |||||