Sequence 1: | NP_001245554.1 | Gene: | pod1 / 31620 | FlyBaseID: | FBgn0029903 | Length: | 1266 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_006082.3 | Gene: | CORO2B / 10391 | HGNCID: | 2256 | Length: | 480 | Species: | Homo sapiens |
Alignment Length: | 400 | Identity: | 140/400 - (35%) |
---|---|---|---|
Similarity: | 220/400 - (55%) | Gaps: | 19/400 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MAWR--FKASKYKNAAPIVPKAEACVREICVGSYQTYGNNI-AASGAFMAFNWEHT-GSSVAVLP 61
Fly 62 LDDCGRKSKTMPLLHGHTDTVTDLKFSPFHDGLLATASQDCLVKIWHIPEKGLEQSLSDPEAIFS 126
Fly 127 HKQRRVETVGFHPTADGLMYSTAAGC---VALFDLSTQKEIFSNNEHPEVIQSASWREDGSVLAT 188
Fly 189 SCKDKNVRIFDPRAAGSPIQLTAESHQSIKDSRVVWLGNQHRILTTGFDAARLRQVIIRDVRNFN 253
Fly 254 TPEKTLELDCSTGILMPLFDPDTNMLFLAGKGDTTINYLEITDKDPYL--IEGLRHTGEQTKGAC 316
Fly 317 LVPKRALKVMEAEVNRVLQLTS--NMVIPIMYQVPRKTYRDFHADLYPETTGYKTELVAGEWLNG 379
Fly 380 SNQAVPKMSL 389 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pod1 | NP_001245554.1 | DUF1899 | 6..62 | CDD:286094 | 15/57 (26%) |
WD40 | <75..237 | CDD:295369 | 59/164 (36%) | ||
WD40 repeat | 83..127 | CDD:293791 | 16/43 (37%) | ||
WD40 repeat | 132..166 | CDD:293791 | 10/36 (28%) | ||
WD40 repeat | 174..210 | CDD:293791 | 14/35 (40%) | ||
WD40 repeat | 217..260 | CDD:293791 | 15/42 (36%) | ||
WD40 repeat | 267..294 | CDD:293791 | 15/26 (58%) | ||
WD40_4 | 341..384 | CDD:292916 | 16/42 (38%) | ||
DUF1899 | 808..866 | CDD:286094 | |||
WD40 | 843..1116 | CDD:295369 | |||
WD40 repeat | 884..923 | CDD:293791 | |||
WD40 repeat | 937..973 | CDD:293791 | |||
WD40 repeat | 979..1016 | CDD:293791 | |||
WD40 repeat | 1024..1064 | CDD:293791 | |||
WD40 repeat | 1071..1094 | CDD:293791 | |||
WD40_4 | 1146..1189 | CDD:292916 | |||
CORO2B | NP_006082.3 | WD40 repeat | 45..85 | CDD:293791 | 12/39 (31%) |
WD 2 | 78..127 | 20/48 (42%) | |||
WD40 repeat | 91..135 | CDD:293791 | 16/43 (37%) | ||
WD 3 | 128..170 | 12/43 (28%) | |||
WD40 repeat | 140..177 | CDD:293791 | 10/38 (26%) | ||
WD 4 | 171..212 | 16/40 (40%) | |||
WD40 repeat | 184..219 | CDD:293791 | 13/34 (38%) | ||
WD 5 | 213..259 | 15/48 (31%) | |||
WD40 repeat | 225..266 | CDD:293791 | 15/40 (38%) | ||
WD 6 | 260..305 | 21/44 (48%) | |||
WD40 repeat | 273..312 | CDD:293791 | 20/38 (53%) | ||
WD 7 | 306..345 | 14/39 (36%) | |||
WD40 | 15..460 | CDD:421866 | 136/390 (35%) | ||
WD 1 | 29..77 | 14/48 (29%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D179930at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |