DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C3G and BUD5

DIOPT Version :9

Sequence 1:NP_572350.2 Gene:C3G / 31618 FlyBaseID:FBgn0259228 Length:1571 Species:Drosophila melanogaster
Sequence 2:NP_009967.2 Gene:BUD5 / 850405 SGDID:S000000634 Length:642 Species:Saccharomyces cerevisiae


Alignment Length:415 Identity:80/415 - (19%)
Similarity:164/415 - (39%) Gaps:122/415 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1178 YIDALIVHAS-RVQKVA--DNAFCEAFITTFRTFIQPIDVIEKLTHRYTYFFCQVQDNKQKAAKE 1239
            |::.::.|.| :.||.:  |:|   ..:..||.:.....::::|...|...      ||.|....
Yeast   231 YLNKMLPHNSHKWQKPSPFDSA---NLLLNFRDWTTDNALLQELLLSYPTI------NKNKHKNH 286

  Fly  1240 TFALLVRV-------VNDLTSTDLTSQLLSLLVEFV-YQLVCSG--QLYLAKL-----------L 1283
            :...|:::       .::.|..|:.:...|.|.|:. ||.:.:.  ||::.|.           |
Yeast   287 SVPRLIQIWVESYWQDSETTLKDILNFWYSHLAEYYEYQELFADIVQLFINKKRTRQLKIHYIGL 351

  Fly  1284 RNKFVEKVTLYKEPKVYGFV------------GELGGAGSVGGAGIAGSGGCSGTAGGGNQPSLL 1336
            .:|.:|:   .|.|..|..:            .||.||..:           |.......|..||
Yeast   352 TDKEIEE---NKPPLDYENLFLQYEIDKTNANDELCGATDL-----------SDLLFQWKQGELL 402

  Fly  1337 DLKSL-------EIAEQMTLLDAELFTKIEIPEVLLFAKDQCEEKSPNLNKFTEHF--------- 1385
            ::::.       .:|:.:|||::.|:..||..|                  ||.||         
Yeast   403 EVEAFALNVSPWSLAKTLTLLESSLYLDIETIE------------------FTRHFKHNDTTIDS 449

  Fly  1386 -----NKMSYWARSKILRLQDAKEREKHVNKFIKIMKHLRKMNNYNSYLALLSALDSGPIRRLEW 1445
                 |::|.:.      |:...::...::.::::......:.|.||..:::::|.:..|.||  
Yeast   450 VFTLSNQLSSYV------LETTLQQTHTISYWLQVALSCLYLRNLNSLASIITSLQNHSIERL-- 506

  Fly  1446 QKGITEEVRS------FCALIDSSSSFRAYRQALA---ETNPPCIPYIGLILQDLTFVHVGNQDY 1501
              .:..:|:|      ...::..::::..||:.:.   .:..||:|:..|:::|:||:..||..:
Yeast   507 --SLPIDVKSDHLFQRLKVVVHPNNNYNVYRRTIKHIFHSQLPCVPFTSLLIRDITFIRDGNDTF 569

  Fly  1502 LSKG-VINFSKRWQQYNIIDNMKRF 1525
            ...| .:|.    |::|.|..:..|
Yeast   570 TKDGNNVNM----QKFNQITKIVAF 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C3GNP_572350.2 RasGEFN 1170..1306 CDD:214571 31/163 (19%)
RasGEF 1335..1558 CDD:238087 43/222 (19%)
BUD5NP_009967.2 RasGEFN 230..339 CDD:214571 24/116 (21%)
RasGEF 409..640 CDD:214539 41/214 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3417
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23113
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.