DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C3G and RASGRF2

DIOPT Version :9

Sequence 1:NP_572350.2 Gene:C3G / 31618 FlyBaseID:FBgn0259228 Length:1571 Species:Drosophila melanogaster
Sequence 2:NP_008840.1 Gene:RASGRF2 / 5924 HGNCID:9876 Length:1237 Species:Homo sapiens


Alignment Length:695 Identity:146/695 - (21%)
Similarity:255/695 - (36%) Gaps:192/695 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   895 HSKHHSLIEG--PRLQLAGSGSCSAFDQRHLDQEPPPLPIKKKHILAYMEICSASTRSIEQHRHT 957
            :::...|::|  |||       |..|      ..||||.:.:         .|:..|        
Human   707 NNRGEHLVDGKSPRL-------CRKF------SSPPPLAVSR---------TSSPVR-------- 741

  Fly   958 MHACNISRNISHSQTMN----IMPMSKELSP--ELEMPPALPPKNYKQRKATSMVASPTLQPVIV 1016
                  :|.:|.:..:|    .:.::...||  ..:.|.|.||.:..|        .|......:
Human   742 ------ARKLSLTSPLNSKIGALDLTTSSSPTTTTQSPAASPPPHTGQ--------IPLDLSRGL 792

  Fly  1017 TTPPPSPKPTLGENGSTGRPDSRMATVCEELNDAV--ASEDAMPEPRSPVLDSNENVSAVDDGQT 1079
            ::|..|| .|:.||....|.|     :|.:|..::  |..::.|..|:.|    |:..|.|..:.
Human   793 SSPEQSP-GTVEENVDNPRVD-----LCNKLKRSIQKAVLESAPADRAGV----ESSPAADTTEL 847

  Fly  1080 FYCHSHQLPAAEMEMSEDASSADNQPITTPQVLEEQEEPTAESRPLVAVHESVKPANVDEDEEAE 1144
            ..|.|...|...........:|||                        .|.||.||:.       
Human   848 SPCRSPSTPRHLRYRQPGGQTADN------------------------AHCSVSPASA------- 881

  Fly  1145 RADMLINMLEEVNITRYLILKKREEDGPEVKGGYIDALIVHASRVQKVADNAFCEAFITTFRTFI 1209
                            :.|.......|.  ..|:        :..::..|..|......|.|.  
Human   882 ----------------FAIATAAAGHGS--PPGF--------NNTERTCDKEFIIRRTATNRV-- 918

  Fly  1210 QPIDVIEKLTHRYTYFFCQVQDNKQKAAKETFALLVRVVNDLTSTDLTSQLLSLLVEFVYQLVCS 1274
              ::|:.....::...|    :...:.......||..|:.|   .||..|........:..|...
Human   919 --LNVLRHWVSKHAQDF----ELNNELKMNVLNLLEEVLRD---PDLLPQERKAAANILRALSQD 974

  Fly  1275 GQ----LYLAKLLRNKFVEKVTLYKEPKVYGFVGELGGAGSVGGAGIAGSGGCSGTAGGGNQPSL 1335
            .|    |.|..:::.....|...::                                        
Human   975 DQDDIHLKLEDIIQMTDCMKAECFE---------------------------------------- 999

  Fly  1336 LDLKSLEIAEQMTLLDAELFTKIEIPEVL--LFAKDQCEEKSPNLNKFTEHFNKMSYWARSKILR 1398
             .|.::|:|||:||||..:|..|...|.|  .:.|....|::|.:.|.::|||.||....|:|:.
Human  1000 -SLSAMELAEQITLLDHVIFRSIPYEEFLGQGWMKLDKNERTPYIMKTSQHFNDMSNLVASQIMN 1063

  Fly  1399 LQDAKEREKHVNKFIKIMKHLRKMNNYNSYLALLSALDSGPIRRLE--WQKGITEEVRSFCALID 1461
            ..|...|...:.|::.:....|.::|||..|.:.|||:...|.||:  |.| ::::.:   ||:|
Human  1064 YADVSSRANAIEKWVAVADICRCLHNYNGVLEITSALNRSAIYRLKKTWAK-VSKQTK---ALMD 1124

  Fly  1462 -------SSSSFRAYRQALAETNPPCIPYIGLILQDLTFVHVGNQDYLSKGVINFSKRWQQYNII 1519
                   |...|:..|:.|...|||.:||:|:.|.||.|:..|..::..:|::||||.....:||
Human  1125 KLQKTVSSEGRFKNLRETLKNCNPPAVPYLGMYLTDLAFIEEGTPNFTEEGLVNFSKMRMISHII 1189

  Fly  1520 DNMKRFKKCAYPFRRNERIIRFFDNFKDFMGEEEMWQISEKIKPR 1564
            ..:::|::.:|......::.::..:....:.|:.::::|.||:||
Human  1190 REIRQFQQTSYRIDHQPKVAQYLLDKDLIIDEDTLYELSLKIEPR 1234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C3GNP_572350.2 RasGEFN 1170..1306 CDD:214571 20/139 (14%)
RasGEF 1335..1558 CDD:238087 68/233 (29%)
RASGRF2NP_008840.1 PH_RasGRF1_2 19..158 CDD:270081
RhoGEF 247..428 CDD:214619
PH 480..588 CDD:214574
RasGEF_N 638..>686 CDD:306971
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 710..809 30/143 (21%)
Regulates proteasomal degradation. /evidence=ECO:0000250 744..752 1/7 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 829..873 12/71 (17%)
RasGEFN <901..972 CDD:214571 13/81 (16%)
RasGEF 998..1234 CDD:214539 71/280 (25%)
Responsible of the affinity for farnesylated versus geranylgeranylated Ras. /evidence=ECO:0000250 1099..1128 10/32 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3417
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2063
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.