DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C3G and sos2

DIOPT Version :9

Sequence 1:NP_572350.2 Gene:C3G / 31618 FlyBaseID:FBgn0259228 Length:1571 Species:Drosophila melanogaster
Sequence 2:NP_001334612.1 Gene:sos2 / 561670 ZFINID:ZDB-GENE-090319-5 Length:1341 Species:Danio rerio


Alignment Length:988 Identity:190/988 - (19%)
Similarity:335/988 - (33%) Gaps:349/988 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   736 VQSSTKSSSSNSEIAFS----ISESTA---------------------VGSSSE----------Y 765
            :.:|...|:.:.|:|||    :.|.|.                     |||..|          |
Zfish   226 MSNSKLFSAQDVELAFSNILEVQELTVKLLGLIEDAVEMTADGSPHPLVGSCFEDLAEEQAFDPY 290

  Fly   766 QQISQLVSHSQ--RHISSSSSSCTTTTTSSSTTTGYGSS------------------------EV 804
            :.:||.:...:  :|.::..|..|......|...|:..:                        ::
Zfish   291 ETLSQDILSKEFCQHFNTLMSRPTVALHFQSIAEGFKEAVQYVLPQLMMVPVYHCIHYFELLQQL 355

  Fly   805 EQLQQQQQQQTTTTPADLAPALPPKSIQRSSLTRHDSPGVGDELDEVQSSSGWASHRSSQSEVAE 869
            ::..::|..:.....|..|......||:|...........|:.|..:.|       |:|:|:.|.
Zfish   356 QECSEEQDDRECLKQAQTALINLQCSIERIYAKHQPRRKQGEPLYRLYS-------RASRSKQAA 413

  Fly   870 LRQLSPLHHLNHHPHTASAGQ-LQQW------------HSKHHSLIEGPRL--------QLAGSG 913
            :::::.:............|| ..|:            |.:|:.|.:|..:        :|.|:|
Zfish   414 IKRMNDIQKSIDGWEGKDIGQCCSQFILEGALLRAGAKHERHNFLFDGLMISCKANQSSRLPGAG 478

  Fly   914 SCSAFDQRHLDQEPPPLPIKKKHILAYMEICSASTRSIEQHRHTMHACNISRNISHSQTMNIMPM 978
            |.:.|            .:|:|.:|....|                                  :
Zfish   479 SGAEF------------RLKEKFVLRKYRI----------------------------------V 497

  Fly   979 SKELSPEL---------EMPPALPPKNYKQRKATSMVASPTLQPVIVTTPPPSPKPTLGENGSTG 1034
            .:|.|||.         |...|:......:.|:..|.|..|||          .:|||       
Zfish   498 DREDSPEFRHAFELVGREESGAVFSARSAEEKSAWMAALVTLQ----------YRPTL------- 545

  Fly  1035 RPDSRMATVCEELNDAVASEDAMPEP---RSPVLDSNENVSAVDDGQTFYCHSHQLPAAEMEMSE 1096
              |..:.||..  .:..|....:|.|   |..:.||.||:                     ...|
Zfish   546 --DRMLDTVLH--REEQAQPLRLPSPDVYRFAIQDSEENI---------------------VFEE 585

  Fly  1097 DASSADNQPITTPQVLEEQEEPTAESRPLVAVHESVKPANVDEDEEAERADMLINMLEEVNITRY 1161
            .|.|....||.                                     :|..::.::|.:....|
Zfish   586 GAQSKTGIPII-------------------------------------KAGTVVKLIERLTYHMY 613

  Fly  1162 LILKKREEDGPEVKGGYIDALIVHASRVQKVADNAFCEAFITTFRTFIQPIDVIEKLTHRYTYFF 1226
                                           ||..|...|:||:|:|.:|.|::..|..|...  
Zfish   614 -------------------------------ADPNFVRTFLTTYRSFCKPQDLLTLLIERIEI-- 645

  Fly  1227 CQVQDNKQKAAKETF--------ALLVRVVNDLTSTDLTSQLLSLLVEFV----YQLVCSGQLY- 1278
              .:....:|.:|..        |.|.|...:... .:..::|::..::|    |......:|| 
Zfish   646 --PEPEPSEADREALWNGEQPMAAELQRFRREYVQ-PVQLRVLNVFRQWVEHHFYDFENDPELYE 707

  Fly  1279 ------------LAKLLRNKFVEKVTLYKEPKVYGFVGELGGAGSVGGAGIAGSGGCSGTAGGGN 1331
                        ..|.:| |:||.::.....|:.                 ..|.|.|......:
Zfish   708 RLEGYLISTTQLRGKSMR-KWVESISKIMRRKIQ-----------------MQSNGISHNITFES 754

  Fly  1332 QP----------------SLLDLKSLEIAEQMTLLDAELFTKIEIPEVL--LFAKDQCEEKSPNL 1378
            .|                .|:.|..:|||.|:|||:::|:..:...|::  ::.|:..|:.||||
Zfish   755 PPPPIEWHISRPGQVDTFDLMTLHPIEIARQLTLLESDLYRAVRPSELVGSVWTKEDKEKNSPNL 819

  Fly  1379 NKFTEHFNKMSYWARSKILRLQDAKEREKHVNKFIKIMKHLRKMNNYNSYLALLSALDSGPIRRL 1443
            .:...|...::.|....|:..::..||....::.|:|::..:::||:|..|.::||::|.|:.||
Zfish   820 LRMIRHTTNLTLWFEKCIVEAENVDERVAVFSRIIEILQVFQELNNFNGVLEIVSAINSVPVYRL 884

  Fly  1444 --------EWQKGITEEVRSFCALIDSSSSFRAYRQALAETNPPCIPYIGLILQDLTFVHVGNQD 1500
                    |.::.|.||     |:..|...|:.|...|...||||:|:.|:.|.::.....||.|
Zfish   885 DHTFEAVPERKRRILEE-----AVELSQDHFKKYLAKLKSINPPCVPFFGIYLTNILKTEEGNPD 944

  Fly  1501 YL---SKGVINFSKRWQQYNIIDNMKRFKKCAYPFRRNERIIRFFDNF--------KDFMGEEEM 1554
            :|   .|.:||||||.:...|...:::::...|..:....|.|||:|.        |||  .:.:
Zfish   945 FLKRDGKELINFSKRRKVAEITGEIQQYQNQPYCLKVEHDIKRFFENLNPMGNMNEKDF--SDYL 1007

  Fly  1555 WQISEKIKPRGRR 1567
            :..|.:|:||..:
Zfish  1008 FNKSLEIEPRNSK 1020

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C3GNP_572350.2 RasGEFN 1170..1306 CDD:214571 28/160 (18%)
RasGEF 1335..1558 CDD:238087 71/243 (29%)
sos2NP_001334612.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3417
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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