DRSC/TRiP Functional Genomics Resources

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Protein Alignment C3G and rasgrf2a

DIOPT Version :9

Sequence 1:NP_572350.2 Gene:C3G / 31618 FlyBaseID:FBgn0259228 Length:1571 Species:Drosophila melanogaster
Sequence 2:XP_009303357.1 Gene:rasgrf2a / 558859 ZFINID:ZDB-GENE-111128-1 Length:1274 Species:Danio rerio


Alignment Length:1136 Identity:211/1136 - (18%)
Similarity:379/1136 - (33%) Gaps:356/1136 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   583 YAQSHNISLNSDLDCSSNISLLNYGVDRLSVRSRSPDENSQC---------------------SF 626
            :.::|..||....:|..|...     |:|   .:..:.|:.|                     :.
Zfish   336 FVRNHQYSLQVLANCKQNRDF-----DKL---LKQYEANAACEGRMLETFLTYPMFQIPRYIITL 392

  Fly   627 DSALNHSREEEDQQQQHQHLRS-FPKLAAMMDEDMD--KMVSYSAAID-----------DKTQTP 677
            ...|.|:..|..:::..:..:| ..:|:.||.:::.  :.:..:.||:           |.:||.
Zfish   393 HELLAHTPHEHVERKSLEFAKSKLEELSKMMHDEVSDTENIRKNLAIERMIVEGCDILLDTSQTF 457

  Fly   678 LSTGGGIAGVAGGTGGAGEGVAAAASGD------GETNSNRHSNESGFVSMREFRTSTQTTDYSV 736
            :..|..|.            :.:...|.      |.....:.:....|:..:.|...|:|:...:
Zfish   458 VRQGSLIQ------------LPSVEKGKLSKVRLGSLTLRKEAERQCFLFTKHFLICTRTSGGKL 510

  Fly   737 QSSTKSSSSNSEIAFSISESTAV----GSSSEYQQISQLVSHSQRHI----SSSSSSCTTTTTSS 793
            ....:..:      .|:.|.|.:    .|..:|....|.::|.:..|    :..||........|
Zfish   511 HLLKQGGT------LSLIECTLIEELDTSDEDYNAAGQGLNHLEFKIVVEPADGSSFSVVLLAPS 569

  Fly   794 STTTGYGSSEVEQLQQQ-----------QQQQTTTTPADLAPALPPKSIQRSSLTRHDSPGVGDE 847
            .......:|::.|....           :.....|.|               .:.:.|:....|:
Zfish   570 RQEKAAWTSDISQCIDNIRCNGLMNSVFEDNSKVTVP---------------HMIKSDARLHKDD 619

  Fly   848 LDEVQSSS---------GWASHRSSQSEVAELRQLSPLHHLNHHPHT------------------ 885
            :|...|.:         .:||.......:.:||.|| :..||...||                  
Zfish   620 VDICFSKTLNSCKVPQIRYASVERLLERLTDLRFLS-IDFLNTFLHTYRIFTTAAVVMDKLADIY 683

  Fly   886 ----ASAGQLQQWHSKHHSLIEG---------PRLQLAGSGSCSAF--------DQRHLDQE--- 926
                .|.....|:||.....|..         .||.|..|.|...|        ...||:.:   
Zfish   684 KKPFTSIPVRVQYHSSDRLSITSICPDYSLKITRLALDQSKSLELFFATNQGPWSGEHLNNKSPR 748

  Fly   927 -------PPPLPIKKKHILAYMEICSASTRSIEQHRHTMHACNISRNISHSQTMNIMPMSKELSP 984
                   |||:.|             .|..|...|         ||.:|.|..::....:.:||.
Zfish   749 LSRKFSSPPPISI-------------TSRTSSPIH---------SRKLSLSSPVSCKAGALDLST 791

  Fly   985 ELEMPPALPPKNYKQRKATSMVASP----TLQPVIVTTPPPSPK---PTLGENGSTGRPDSRMAT 1042
            ......:.|...|     ..::.||    |..|:.::..|.||:   .|..|.|...|.|:....
Zfish   792 STFSAASSPTSPY-----NPIICSPPPTCTKAPLDLSRGPSSPELCPSTPEEGGELPRIDAFCGK 851

  Fly  1043 VCEELNDAVASEDAMPE--PRSPVLDSNENVSAVDDGQTFYCHSHQLPAAEME------------ 1093
            :...:..||....::.:  |.:|....:..:|......|.....::.||.:..            
Zfish   852 LRRSIRRAVLESVSLDKFIPETPTSSDSGEMSPSRSPSTPRHLRYRQPAGQCPDNSRCAVSPASA 916

  Fly  1094 ---MSEDASSADNQPITTPQVLEEQE---EPTAESRPLVAVHESVKPANVDEDEEAERADMLINM 1152
               .:..|..:..|..|.|:...::|   ...|.:|.|..:...|...:.|.:..||....::.:
Zfish   917 FAIATAAAGHSSPQGFTNPEKSYDKEFLIRRAATNRVLNVLRHWVSKHSQDFEMNAELTTAVMAL 981

  Fly  1153 LEEVNITRYLILKKREEDGPEVKGGYIDALIVHASRVQKVADNAFCEAFITTFRTFIQPIDVIEK 1217
            ||||.....|:.::|                       |.|                  ::::..
Zfish   982 LEEVLRDPDLLPQER-----------------------KAA------------------VNILSA 1005

  Fly  1218 LTHRYTYFFCQVQDNKQKAAKETFALLVRVVNDLTSTDLTSQLLSLLVEFVYQLV-CSGQLYLAK 1281
            |:.       :.||:.|                            |.:|.:.|:| |        
Zfish  1006 LSQ-------EEQDDSQ----------------------------LKIEDIVQMVDC-------- 1027

  Fly  1282 LLRNKFVEKVTLYKEPKVYGFVGELGGAGSVGGAGIAGSGGCSGTAGGGNQPSLLDLKSLEIAEQ 1346
                           |:...|.                                 .|.::|:|||
Zfish  1028 ---------------PRAECFE---------------------------------SLSAMELAEQ 1044

  Fly  1347 MTLLDAELFTKIEIPEVL--LFAKDQCEEKSPNLNKFTEHFNKMSYWARSKILRLQDAKEREKHV 1409
            :||||..:|..|...|.|  .:.|....|::|.:.|.::|||.||....|:|:...|...|...:
Zfish  1045 ITLLDHIVFRNIPYEEFLGQGWMKMDKNERTPYIMKTSQHFNDMSNLVASEIMAHADVSSRAGSI 1109

  Fly  1410 NKFIKIMKHLRKMNNYNSYLALLSALDSGPIRRLE--WQKGITEEVRSFC----ALIDSSSSFRA 1468
            :|::.:....|.:||||..|.:.|||:...|.||:  |.| :.::.::..    .::.|...|:.
Zfish  1110 DKWLAVADICRCLNNYNGVLEITSALNRSAIYRLKKTWAK-VCKQTKALMDRLQKIVSSEGRFKN 1173

  Fly  1469 YRQALAETNPPCIPYIGLILQDLTFVHVGNQDYLSKGVINFSKRWQQYNIIDNMKRFKKCAYPFR 1533
            .|:.|...||||:||:|:.|.||.|:..|..::..:|::||||.....:||..:::|::..|...
Zfish  1174 LRETLKNCNPPCVPYLGMYLTDLAFIEEGTPNFTEEGLVNFSKMRMISHIIREIRQFQQAPYRIE 1238

  Fly  1534 RNERIIRFFDNFKDFMGEEEMWQISEKIKPR 1564
            ...::.:|..:....|.|:.::::|.||:||
Zfish  1239 LQPKVTQFLLDKTLVMDEDTLYELSLKIEPR 1269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C3GNP_572350.2 RasGEFN 1170..1306 CDD:214571 13/136 (10%)
RasGEF 1335..1558 CDD:238087 69/230 (30%)
rasgrf2aXP_009303357.1 PH_RasGRF1_2 19..155 CDD:270081
PH 24..130 CDD:278594
RhoGEF 244..425 CDD:279015 16/96 (17%)
PH 478..585 CDD:214574 18/112 (16%)
PH 489..584 CDD:278594 17/100 (17%)
RasGEF_N 635..>683 CDD:279012 10/48 (21%)
REM <935..1007 CDD:295342 17/112 (15%)
RasGEF 1033..1265 CDD:238087 71/265 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3417
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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