DRSC/TRiP Functional Genomics Resources

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Protein Alignment C3G and sos1

DIOPT Version :9

Sequence 1:NP_572350.2 Gene:C3G / 31618 FlyBaseID:FBgn0259228 Length:1571 Species:Drosophila melanogaster
Sequence 2:NP_001076462.1 Gene:sos1 / 556286 ZFINID:ZDB-GENE-070209-128 Length:713 Species:Danio rerio


Alignment Length:421 Identity:104/421 - (24%)
Similarity:188/421 - (44%) Gaps:79/421 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1178 YIDALIVHASRVQKVADNAFCEAFITTF--------RTFIQPIDVIEKLTHRYTYFFCQVQDNKQ 1234
            ||:.||:       |..|..|:|...|.        |:|..||:       ::.....|....|:
Zfish    47 YIEGLIL-------VLLNTLCQAQPRTVQDVEERVQRSFPHPIE-------KWAIADAQAAIEKR 97

  Fly  1235 KAAKETFALLVRVVNDLTSTDLTSQL---LSLLVEFVYQLVCSGQLYLAKLLRNKFVEKVTLYKE 1296
            | .:...||.|..::.|....|..::   :|:.:..|.:.:.:..|.||    ..:|..:..|: 
Zfish    98 K-RRNPLALPVDKIHPLLKEVLGYKIDHQVSVYIVAVLEYISADILKLA----GNYVRNIRHYE- 156

  Fly  1297 PKVYGFVGELGGAGSVGGAGIAGSGGCSGTAGGGNQPSLLD-LKSLEIAEQMTLLDAELFTKIEI 1360
                           :....|        |........|:| |..:|||.|:|||:::.:..::.
Zfish   157 ---------------ISQQDI--------TVAMCADKVLMDMLHPIEIARQLTLLESDFYRAVQP 198

  Fly  1361 PEVL--LFAKDQCEEKSPNLNKFTEHFNKMSYWARSKILRLQDAKEREKHVNKFIKIMKHLRKMN 1423
            .|::  ::.|:..|..||||.:...|...::.|....|:..::.:||...|::.|:|::..:::|
Zfish   199 SELVGSVWTKEDKEINSPNLLRMIRHTTNLTLWLEKCIVETENVEERVSVVSRIIEILQVFQELN 263

  Fly  1424 NYNSYLALLSALDSGPIRRLEW--------QKGITEEVRSFCALIDSSSSFRAYRQALAETNPPC 1480
            |:|..|.::||::|.|:.||:.        |:.|.||....     |...::.|...|...||||
Zfish   264 NFNGVLEVVSAMNSSPVYRLDHTFEQIPSRQRKILEEAHEL-----SEDHYKKYLAKLRSINPPC 323

  Fly  1481 IPYIGLILQDLTFVHVGNQDYLSK---GVINFSKRWQQYNIIDNMKRFKKCAYPFRRNERIIRFF 1542
            :|:.|:.|.::.....||.|:|.:   .:||||||.:...|...:::::...|..|....|.:||
Zfish   324 VPFFGIYLTNILKTEEGNPDFLKRHGTELINFSKRRKVAEITGEIQQYQNQPYCLRVENDIRKFF 388

  Fly  1543 DN---FKDFMGEE---EMWQISEKIKPRGRR 1567
            :|   .:|.|.:|   .::..|.:|:||..|
Zfish   389 ENLNPMEDMMEKEFTDYLFNKSLEIEPRNAR 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C3GNP_572350.2 RasGEFN 1170..1306 CDD:214571 28/138 (20%)
RasGEF 1335..1558 CDD:238087 69/242 (29%)
sos1NP_001076462.1 Histone 58..169 CDD:278551 24/146 (16%)
H2A 97..183 CDD:305064 20/114 (18%)
RasGEF 174..412 CDD:238087 69/242 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2063
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

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