DRSC/TRiP Functional Genomics Resources

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Protein Alignment C3G and rasgrf2b

DIOPT Version :9

Sequence 1:NP_572350.2 Gene:C3G / 31618 FlyBaseID:FBgn0259228 Length:1571 Species:Drosophila melanogaster
Sequence 2:XP_009300046.1 Gene:rasgrf2b / 553520 ZFINID:ZDB-GENE-060504-1 Length:1275 Species:Danio rerio


Alignment Length:707 Identity:155/707 - (21%)
Similarity:253/707 - (35%) Gaps:201/707 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   892 QQWHSKHHSLIEGPRLQLAGSGSCSAFDQRHLDQEPPPLPIKKKHILAYMEICSASTRSIEQHRH 956
            |...|..|...:.|||       |..|      ..||||.|            |:.|.|..:.| 
Zfish   733 QNNRSGDHVNDKSPRL-------CRKF------SSPPPLSI------------SSRTSSPVRTR- 771

  Fly   957 TMHACNISRNISHSQTMNIMPMSKELS----------PELEMPPALPPKNYKQRKATSMVASPTL 1011
                 .:|.|......:.|:.:|...|          |.:..||:....|.|.....|...||  
Zfish   772 -----KLSLNSPIGSKVGILDLSTTSSSAASSPTSANPTISPPPSNNNNNSKPPLDLSRGQSP-- 829

  Fly  1012 QPVIVTTPPPSPKPTLGENGSTGRPDSRMATVCEELNDAVASEDAMPEPRSPVLDS-------NE 1069
                 ::|..|| ..|.:|....|.|:    :|.:|..::         |..||:|       .|
Zfish   830 -----SSPEQSP-GALDDNAEVPRIDA----LCGKLRRSI---------RRAVLESVSLDKFIPE 875

  Fly  1070 NVSAVDDGQTFYCHSHQLPAAEMEMSEDASSADNQPITTPQVLEEQEEPTAESRPLVAVHESVKP 1134
            :..|.:.|:...|.|...|...........:|:|...:.        .|.:......|......|
Zfish   876 SPQASEPGEISPCRSPSTPRHLRYRQSGVQTAENSRCSV--------SPASAFAIATAAAGHSSP 932

  Fly  1135 ANVDEDEEAERADMLINML---EEVNITRYLILKKRE--EDGPEVKGGYIDALIVHASRVQKVAD 1194
            ...:..|.....:.:|...   ..:|:.|:.:.|..:  |...|:|.|.|..|            
Zfish   933 PVFNNSERTCDKEFIIRRAATNRVLNVLRHWVSKHSQDFEMNGELKMGVICLL------------ 985

  Fly  1195 NAFCEAFITTFRTFIQPIDVIEKLTHRYTYFFCQVQDNKQKAAKETFALLVRVVNDLTSTDLTSQ 1259
                       ...::..|::.             |:.|..|         .:::.|:..|... 
Zfish   986 -----------EEVLRDPDLLP-------------QERKATA---------NILSALSQDDQDD- 1016

  Fly  1260 LLSLLVEFVYQLV-CSGQLYLAKLLRNKFVEKVTLYKEPKVYGFVGELGGAGSVGGAGIAGSGGC 1323
             ..|.:|.:.|:. |                       ||...|.                    
Zfish  1017 -AQLKIEDILQMAEC-----------------------PKAECFE-------------------- 1037

  Fly  1324 SGTAGGGNQPSLLDLKSLEIAEQMTLLDAELFTKIEIPEVL--LFAKDQCEEKSPNLNKFTEHFN 1386
                         .|.::|||||:||||..:|..|...|.|  .:.|....|::|.:.|.::|||
Zfish  1038 -------------SLSAMEIAEQITLLDHIVFRSIPYEEFLGQGWMKTDKTERTPYIMKTSQHFN 1089

  Fly  1387 KMSYWARSKILRLQDAKEREKHVNKFIKIMKHLRKMNNYNSYLALLSALDSGPIRRLE--WQKGI 1449
            .||....|:|:...|...|...:.|::.:....|.:||||..|.:.|||:...|.||:  |.| :
Zfish  1090 DMSNLVASQIMSHTDVGSRAGSIEKWVAVADICRCLNNYNGVLEITSALNRSAIYRLKKTWAK-V 1153

  Fly  1450 TEEVRSFCALID-------SSSSFRAYRQALAETNPPCIPYIGLILQDLTFVHVGNQDYLSKGVI 1507
            .::.:   ||:|       |...|:..|:.|...||||:||:|:.|.||.|:..|..::..:|::
Zfish  1154 CKQTK---ALMDKLQKTVSSEGRFKNLRETLKNCNPPCVPYLGMYLTDLAFIEEGTPNFTEEGLV 1215

  Fly  1508 NFSKRWQQYNIIDNMKRFKKCAYPFRRNERIIRFFDNFKDFMGEEEMWQISEKIKPR 1564
            ||||.....:||..:::|::..|......::.::..:....|.|:.::.:|.||:||
Zfish  1216 NFSKMRMISHIIREIRQFQQTPYRIEHQPKVTQYLLDKTLIMDEDTLYDLSLKIEPR 1272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C3GNP_572350.2 RasGEFN 1170..1306 CDD:214571 18/136 (13%)
RasGEF 1335..1558 CDD:238087 72/233 (31%)
rasgrf2bXP_009300046.1 PH_RasGRF1_2 19..154 CDD:270081
PH 24..129 CDD:278594
RhoGEF 243..424 CDD:279015
PH 476..584 CDD:214574
PH 476..583 CDD:278594
RasGEF_N 634..>682 CDD:279012
REM <938..1010 CDD:295342 15/116 (13%)
RasGEF 1036..1272 CDD:214539 76/272 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3417
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2063
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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