DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C3G and CG4853

DIOPT Version :9

Sequence 1:NP_572350.2 Gene:C3G / 31618 FlyBaseID:FBgn0259228 Length:1571 Species:Drosophila melanogaster
Sequence 2:NP_611222.2 Gene:CG4853 / 36974 FlyBaseID:FBgn0034230 Length:709 Species:Drosophila melanogaster


Alignment Length:856 Identity:154/856 - (17%)
Similarity:294/856 - (34%) Gaps:274/856 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   791 TSSSTTTGYGSSEVEQLQQQQQQQTTTTPADL--APALPPKSIQRSSLTRHDSPGVGDELDEVQS 853
            ||||            |||::.......|..|  .||....:| :::|.....|.| :.|:::..
  Fly    24 TSSS------------LQQEEVLLVNGVPVKLDGLPADDASAI-KAALLEGQMPSV-EHLNQLLF 74

  Fly   854 SSGWASHR---------------------SSQSEVAELRQLSPLHHLNHHPHTASAGQLQQWHSK 897
            .:|.|...                     |...::.:.|.:....:.||..|     |.:.||  
  Fly    75 RAGLAQQPIEVETSLTVKSSLTTTEEVLVSRNGQILDERTVETKENFNHQSH-----QKEIWH-- 132

  Fly   898 HHSLIEGPRLQLAGSGSCSAFDQRHLDQEPPPLPIKKKHILAYMEICSASTRSIEQHRHTMHACN 962
                                             |:|::..||     .|:..:..::|.|.:: .
  Fly   133 ---------------------------------PVKQQSALA-----RATPENALKYRTTSNS-T 158

  Fly   963 ISRNISHSQTMNIMPMSKELSPELEMPPALPPKNYKQRKATSMVASPTLQPVIVTTPPPSPKPTL 1027
            .:...:.|....:.|:.::|             |.....|:.|.:|..:         ......:
  Fly   159 FASQATDSDERPVDPLGRQL-------------NQTFSNASLMSSSSAI---------TGSDQVI 201

  Fly  1028 GENGST--GRPDSRMATVCEELND----AVASEDAMPEPRSPVLDSNENVSAVDDGQTFYCHSHQ 1086
            |...||  |...|.::: |:..:|    :|:.......||..:.||            .||   .
  Fly   202 GSVSSTTIGDKSSNISS-CDSGHDGLFHSVSMSAPWSHPRDTLTDS------------LYC---D 250

  Fly  1087 LPAAEMEMSEDASSADNQPITTPQVLEEQEEPTAESRPLVAVHESVKPANVDEDEEAERADMLIN 1151
            :|::..|  .||.|..|..:...:..:.|..|       |...:..|..|:|.         ::|
  Fly   251 IPSSADE--SDAVSILNTHLKITEPFDCQTAP-------VYAKDIPKKGNLDS---------VVN 297

  Fly  1152 MLEEVNITRYLILKKREEDGPEVKGGYIDALIVHASRVQKVADNAFCEAFITTFRTFIQPIDVIE 1216
            :|...|                                  ..|..|  ||:||.|.|..|..::.
  Fly   298 LLINNN----------------------------------TKDLRF--AFLTTSRLFSPPHQLLS 326

  Fly  1217 KLTHRYTYFFCQVQDNKQKAAKETFALLVRVVNDLTSTDLTSQLLSLLVEFVYQLVCSG----QL 1277
            |:..:.        ||:::.       ::|::|:...|                  |.|    :|
  Fly   327 KIIAKI--------DNEEEN-------VLRLLNEWLDT------------------CPGDFSHEL 358

  Fly  1278 YLAKLLRNKFVEKVTLYKE--PKVYGFVGELGGAGSVGGAGIAGSGGCSGTAGGGNQPSLLDLK- 1339
            .|.:|...:.|:.:..:.:  |:......| .|...:.......|...|    .|.|.|:..|| 
  Fly   359 LLQELENKRNVKGLAAFLDGIPQALAQKDE-NGRSQLNNLLTKQSSASS----LGRQSSIKSLKR 418

  Fly  1340 -----------------SLEIAEQMTLLDAELFTKIEIPE-VLLFAKDQ---CEEKSP------- 1376
                             :.|:|.|:..::....::|.:.| |.:..||:   |..::.       
  Fly   419 FAANVYKTDNVLNNCSSAFELAHQLYAIEYAYLSQIRLEEFVEILEKDELKTCISQTKAGTLGSN 483

  Fly  1377 -----NLNKFTEHFNKMSYWARSKILRLQDAKEREKHVNKFIKIMKHLRKMNNYNSYLALLSALD 1436
                 .::.:.:.||::||...::||:|....:|.:.::.:::.........|:||.:|:|:||:
  Fly   484 CISQVTIDSYVQWFNQLSYLTATEILKLGKKSQRAQMIDFWVETALECFNTGNFNSLMAILTALN 548

  Fly  1437 SGPIRRLE--WQKGITEEVRSFCALIDSSSSFRAYRQALA------------ETNPPCIPYIGLI 1487
            ...|.||:  |.|..|.:.......:|.||:|..||..:.            |.....||:..|.
  Fly   549 LTAIARLKKTWAKVQTTKFEGLEHQMDPSSNFLNYRSTMKAAVWRSEREMANEIERAIIPFFSLF 613

  Fly  1488 LQDLTFVHVGNQDYLSKGVINFSKRWQQYNIIDNMKRFKKCAYPFRRNERIIRFFDNFKDFMGEE 1552
            |:||..::..::..|:.|.|||.|.......:.|..::::...|:.:...::.:... .:.:.|:
  Fly   614 LKDLHAINESHETKLANGYINFEKCLHLGTQLRNFGKWQRLDCPYEQLPSVVSYLLK-AEVLSED 677

  Fly  1553 EMWQISEKIKP 1563
            .:.:.|.:.:|
  Fly   678 LLMKASYESEP 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C3GNP_572350.2 RasGEFN 1170..1306 CDD:214571 22/141 (16%)
RasGEF 1335..1558 CDD:238087 54/270 (20%)
CG4853NP_611222.2 RasGEF_N 288..365 CDD:279012 26/154 (17%)
RasGEF 438..638 CDD:279011 48/199 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467905
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23113
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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