DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment C3G and Sos

DIOPT Version :9

Sequence 1:NP_572350.2 Gene:C3G / 31618 FlyBaseID:FBgn0259228 Length:1571 Species:Drosophila melanogaster
Sequence 2:NP_476597.2 Gene:Sos / 34790 FlyBaseID:FBgn0001965 Length:1596 Species:Drosophila melanogaster


Alignment Length:1309 Identity:246/1309 - (18%)
Similarity:434/1309 - (33%) Gaps:454/1309 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 GSGLGGIGAAAEIMGAVTASPGASVPGTGVMRV--------SAAESAAQRTSLPDIALTPKERDI 509
            |.|.||.|:.::..|.     |..:.|.||..:        :..|:||:...|    .||..:.:
  Fly    25 GGGSGGSGSGSQGGGG-----GIGIGGGGVAGLQDCDGYDFTKCENAARWRGL----FTPSLKKV 80

  Fly   510 LEQHNVNPMRGSHSTESI-------LRDTSPPPKPPLPN---------RASNPPPL--------- 549
            |||  |:| |.:...:::       ||..:.....|||:         ..|.|.|:         
  Fly    81 LEQ--VHP-RVTAKEDALLYVEKLCLRLLAMLCAKPLPHSVQDVEEKVNKSFPAPIDQWALNEAK 142

  Fly   550 ----PPKRRS--------------------QPSASAGTVGVGCSSSTSTSNQASPLPYAQSHNIS 590
                ..||:|                    ..|.||..|.|....|......|.......:|...
  Fly   143 EVINSKKRKSVLPTEKVHTLLQKDVLQYKIDSSVSAFLVAVLEYISADILKMAGDYVIKIAHCEI 207

  Fly   591 LNSDLDCSSN-----ISLLNYGVDRLSVRSRS-PDENSQCSFDSALNHSREEEDQQQQHQHLRSF 649
            ...|::...|     :.:||.....:.....| |.:.:..:::..:.....:|.|.|:..|:   
  Fly   208 TKEDIEVVMNADRVLMDMLNQSEAHILPSPLSLPAQRASATYEETVKELIHDEKQYQRDLHM--- 269

  Fly   650 PKLAAMMDEDMDKMVSYSAAIDDKTQTPLSTGGGIAGVAGGTGGAGEGVAAAASGDGETNSNRHS 714
              :..:..|::.|:||     |.:...|:                                    
  Fly   270 --IIRVFREELVKIVS-----DPRELEPI------------------------------------ 291

  Fly   715 NESGFVSMREFRTSTQTTDYSVQSSTKSSSSNSEIAFSISESTAVGSSSE----------YQQIS 769
                |.::.:....|.|...|::...:.|...|        :..|||..|          |::.:
  Fly   292 ----FSNIMDIYEVTVTLLGSLEDVIEMSQEQS--------APCVGSCFEELAEAEEFDVYKKYA 344

  Fly   770 QLVSHSQRHISSSSSSCTTTTTSSSTTTGYG---------------------------------S 801
            ..|: ||....:.::..:....||.||.|:|                                 |
  Fly   345 YDVT-SQASRDALNNLLSKPGASSLTTAGHGFRDAVKYYLPKLLLVPICHAFVYFDYIKHLKDLS 408

  Fly   802 SEVEQLQQQQQQQTTTTP--ADLAPALPPKSIQRSSLTRHDSPGVGDELDEVQSSSGWASHRSSQ 864
            |..:.::..:|.|....|  .||...:       :||::.....|          ||....:.:.
  Fly   409 SSQDDIESFEQVQGLLHPLHCDLEKVM-------ASLSKERQVPV----------SGRVRRQLAI 456

  Fly   865 SEVAELRQLSPLHHLNHHPHTASAGQLQQWHSKH-----HSLIEGPRLQLAGSGSCSAFDQRHLD 924
            ....||:.                 :::.|..|.     :..|....|...|||       :.:.
  Fly   457 ERTRELQM-----------------KVEHWEDKDVGQNCNEFIREDSLSKLGSG-------KRIW 497

  Fly   925 QEPPPLPIKKKHIL--AYMEICSASTRSIEQHRHTMHACNISRNISHSQTMNIMPMSKELSPELE 987
            .|       :|..|  ..|.:|.|:|:                    .||    |.:...:.:..
  Fly   498 SE-------RKVFLFDGLMVLCKANTK--------------------KQT----PSAGATAYDYR 531

  Fly   988 MPPALPPKNYKQRKATSMVASPTLQPVIVTTPPPSPKPTLGENGSTGRPDSRMATVCEELNDAVA 1052
            :     .:.|..|:.                            ....||||         :|...
  Fly   532 L-----KEKYFMRRV----------------------------DINDRPDS---------DDLKN 554

  Fly  1053 SEDAMPEPRSPVLDSNENVSAVDDGQTFYCHSHQLPAAEMEMSEDASSADNQPITTPQVLEEQEE 1117
            |.:..|..:.|::.:.:|..          |.|.. .|::.|....|..|..   ...:|::.|.
  Fly   555 SFELAPRMQPPIVLTAKNAQ----------HKHDW-MADLLMVITKSMLDRH---LDSILQDIER 605

  Fly  1118 PTAESRPLVAVHESVKPANVDEDEEAERADMLINMLEEVNITRYLILKKREEDG-PEVKGG---- 1177
            ......|...:::...|.:.|.                      ::|::||..| |.:||.    
  Fly   606 KHPLRMPSPEIYKFAVPDSGDN----------------------IVLEERESAGVPMIKGATLCK 648

  Fly  1178 YIDALIVHASRVQKVADNAFCEAFITTFRTFIQPIDVIEKLTHRYT------------------- 1223
            .|:.|..|.     .||..|...|:||:|.|..|..:::.|..|:.                   
  Fly   649 LIERLTYHI-----YADPTFVRTFLTTYRYFCSPQQLLQLLVERFNIPDPSLVYQDTGTAGAGGM 708

  Fly  1224 --------YFFCQVQDNKQKAAKETFALLVRVVNDLT--------STDLTSQLLSLLVEFVYQLV 1272
                    :.....:|.|:...:....:..||:|.|.        ..:....||..|:.|:..: 
  Fly   709 GGVGGDKEHKNSHREDWKRYRKEYVQPVQFRVLNVLRHWVDHHFYDFEKDPMLLEKLLNFLEHV- 772

  Fly  1273 CSGQLYLAKLLRNKFVEKVTLYKEPK----------VYGFVGELGGAGSVGGAGIAGSGGCSGTA 1327
             :|     |.:| |:|:.|....:.|          ||.:                         
  Fly   773 -NG-----KSMR-KWVDSVLKIVQRKNEQEKSNKKIVYAY------------------------- 805

  Fly  1328 GGGNQP--------------SLLDLKSLEIAEQMTLLDAELFTKIEIPEVL--LFAKDQCEEKSP 1376
              |:.|              :||.|..||:|.|:|||:.|::..::..|::  .:.|...|.|||
  Fly   806 --GHDPPPIEHHLSVPNDEITLLTLHPLELARQLTLLEFEMYKNVKPSELVGSPWTKKDKEVKSP 868

  Fly  1377 NLNKFTEHFNKMSYWARSKILRLQDAKEREKHVNKFIKIMKHLRKMNNYNSYLALLSALDSGPIR 1441
            ||.|..:|...::.|....|...::.:||...:.:.|::|..:.::||:|..|::::|:.:..:.
  Fly   869 NLLKIMKHTTNVTRWIEKSITEAENYEERLAIMQRAIEVMMVMLELNNFNGILSIVAAMGTASVY 933

  Fly  1442 RLEWQ-KGITEEVRSF---CALIDSSSSFRAYRQALAETNPPCIPYIGLILQDLTFVHVGNQDYL 1502
            ||.|. :|:.|..|.|   |..: |....:.|::.|...||||:|:.|..|.::..:..||.|.|
  Fly   934 RLRWTFQGLPERYRKFLEECREL-SDDHLKKYQERLRSINPPCVPFFGRYLTNILHLEEGNPDLL 997

  Fly  1503 SK-GVINFSKRWQQYNIIDNMKRFKKCAYPFRRNERIIRFFDNFKDFMG------EEEMWQISEK 1560
            :. .:||||||.:...||..:::::...|.......|.:||:....|.|      .:.::..|.:
  Fly   998 ANTELINFSKRRKVAEIIGEIQQYQNQPYCLNEESTIRQFFEQLDPFNGLSDKQMSDYLYNESLR 1062

  Fly  1561 IKPRGRRPV 1569
            |:|||.:.|
  Fly  1063 IEPRGCKTV 1071

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C3GNP_572350.2 RasGEFN 1170..1306 CDD:214571 37/185 (20%)
RasGEF 1335..1558 CDD:238087 68/235 (29%)
SosNP_476597.2 Histone 90..216 CDD:278551 20/125 (16%)
H2A 155..>196 CDD:305064 6/40 (15%)
RhoGEF 249..432 CDD:238091 36/241 (15%)
PH_SOS 476..586 CDD:269963 29/200 (15%)
PH 482..587 CDD:278594 30/195 (15%)
RasGEFN 637..791 CDD:214571 34/166 (20%)
RasGEF 825..1062 CDD:238087 69/237 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467919
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3417
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23113
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2063
SonicParanoid 00.000 Not matched by this tool.
54.870

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