DRSC/TRiP Functional Genomics Resources

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Protein Alignment C3G and ste6

DIOPT Version :9

Sequence 1:NP_572350.2 Gene:C3G / 31618 FlyBaseID:FBgn0259228 Length:1571 Species:Drosophila melanogaster
Sequence 2:NP_588316.1 Gene:ste6 / 2538724 PomBaseID:SPCC1442.01 Length:911 Species:Schizosaccharomyces pombe


Alignment Length:455 Identity:104/455 - (22%)
Similarity:182/455 - (40%) Gaps:102/455 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1166 KREEDGPEVKGGYIDALIVHASRVQKVADNAFCEAFITTFRTFIQPIDVIEKLTHRYTYFFCQVQ 1230
            |.|:|| ::|...:..:|.:..|.. :....|...|:.|:.:.|...|:...|...:. |.|.:.
pombe   486 KIEQDG-KIKTATLVFIINYLLRTD-IDSTFFTTIFLNTYASMISSSDLFSILGAHFR-FICSLN 547

  Fly  1231 DNKQKAAKETF----------------ALLVRVVNDLTSTDLTSQLLSLLVEFVYQLVCSGQLYL 1279
            ..|.......|                :.||..:::..|.....::..:...||.....|.:..|
pombe   548 FGKISFISHEFYRVSKRFLDILLIWFESYLVEELDNSKSIFFLFKIYKVFEVFVVPHFASAEELL 612

  Fly  1280 ---------------AKLLRNK----FVEKVTLYKEPKVYGFVGELGGAGSVGGAGIAGSGGCSG 1325
                           .|:|..|    .:|.::|:..|....:..||                   
pombe   613 HSLSHLLHHPSTKRSHKMLEGKELSQELEDLSLHNSPDPIIYKDEL------------------- 658

  Fly  1326 TAGGGNQPSLLDLKSLEIAEQMTLLDAELFTKIEIPEVLLFAKDQCEEKSPNLNKF-----TEHF 1385
                     :|.|...|||:|:.:|:.:.|:.|...:.|....|       |||:|     |..|
pombe   659 ---------VLLLPPREIAKQLCILEFQSFSHISRIQFLTKIWD-------NLNRFSPKEKTSTF 707

  Fly  1386 ---NKMSYWARSKILRLQDAKEREKHVNKFIKIMKHLRKMNNYNSYLALLSALDSGPIRRLE--W 1445
               |.:..:....|::.::.:.|...:..||::..:||::||:.|..:::|||:|.||.||.  |
pombe   708 YLSNHLVNFVTETIVQEEEPRRRTNVLAYFIQVCDYLRELNNFASLFSIISALNSSPIHRLRKTW 772

  Fly  1446 QKGITEEVRSF---CALIDSSSSFRAYRQALAETNPPCIPYIGLILQDLTFVHVGNQDYLSKGVI 1507
            ....::.:.||   ..|.::..:|..||..|.....||:|::|:...||||:..||:|.. :.:|
pombe   773 ANLNSKTLASFELLNNLTEARKNFSNYRDCLENCVLPCVPFLGVYFTDLTFLKTGNKDNF-QNMI 836

  Fly  1508 NFSKRWQQYNIIDNMKRFKKCAYPFR--------RNERIIRFFDNFKDFMGEEEMWQISEKIKPR 1564
            ||.||.:...|::.:|:|:...|.|.        .||.|.|       ......::|.|..::||
pombe   837 NFDKRTKVTRILNEIKKFQSVGYMFNPINEVQELLNEVISR-------ERNTNNIYQRSLTVEPR 894

  Fly  1565  1564
            pombe   895  894

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C3GNP_572350.2 RasGEFN 1170..1306 CDD:214571 28/170 (16%)
RasGEF 1335..1558 CDD:238087 69/243 (28%)
ste6NP_588316.1 SH3 7..55 CDD:214620
RasGEFN 489..604 CDD:214571 20/117 (17%)
RasGEF 659..895 CDD:214539 72/251 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3417
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23113
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2063
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.940

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