DRSC/TRiP Functional Genomics Resources

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Protein Alignment C3G and Rasgrp4

DIOPT Version :10

Sequence 1:NP_572350.2 Gene:C3G / 31618 FlyBaseID:FBgn0259228 Length:1571 Species:Drosophila melanogaster
Sequence 2:XP_038939950.1 Gene:Rasgrp4 / 170668 RGDID:620476 Length:726 Species:Rattus norvegicus


Alignment Length:349 Identity:80/349 - (22%)
Similarity:147/349 - (42%) Gaps:44/349 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  1251 LTSTDLTSQLLSLLVEFVYQLVCSG-----QLYLAKLLRNKFV-EKVTLYKEPKVYGFVG----- 1304
            |.|:||.::||:     .||.....     ||.:..|:|.... ....:::||::...:.     
  Rat   141 LPSSDLAARLLT-----SYQKAAKDARELRQLQICYLVRYWLTHHPEVVHQEPQLEAIINRFWTT 200

  Fly  1305 ----------ELGGAG---SVGGAG---IAGSGGCSGTAGGGNQPSLL--DLKSLEIAEQMTLLD 1351
                      .||.|.   |.||.|   :..|.|    .|...:.|||  .|::.|:|:.:|.|:
  Rat   201 VAQEGNMAQRSLGDASNLLS
PGGPGPPPLMSSPG----LGKKRKVSLLFDHLETEELAQHLTYLE 261

  Fly  1352 AELFTKIEIPEVLLFAKDQCEEKSPNLNKFTEHFNKMSYWARSKILRLQDAKEREKHVNKFIKIM 1416
            ...|..|...::..:.........|.|.......|.:|.|.:..:|......:|.:.::|||::.
  Rat   262 FRSFQAITPQDLRGYVLQGSVRGCPALEGSVGLSNSVSRWVQVMVLSRPGPAQRAQVLDKFIRVA 326

  Fly  1417 KHLRKMNNYNSYLALLSALDSGPIRRLE-----WQKGITEEVRSFCALIDSSSSFRAYRQALAET 1476
            :.||:|.|:|:.:|:...|....|.||:     .....|:.:.....|:.|.:::..||:..|..
  Rat   327 QRLRQMQNFNTLMAVTGGLCHSAISRLKDSHVHLSPDSTKALLELTELLSSHNNYAYYRRTWASC 391

  Fly  1477 NPPCIPYIGLILQDLTFVHVGNQDYLSKGVINFSKRWQQYNIIDNMKRFKKCAYPFRRNERIIRF 1541
            ....:|.:|:.|:||..::..:.|.|..|.::..|....|..:..:...::...|...||.::..
  Rat   392 TDFRLPVLGVHLKDLVSLYEAHPDRLPDGRLHLPKLNSLYLRLQELAALQRQHPPCSANEDLLHL 456

  Fly  1542 FDNFKD-FMGEEEMWQISEKIKPR 1564
            .....| |..|:|::::|...:||
  Rat   457 LTLSLDLFYTEDEIYELSYAREPR 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C3GNP_572350.2 RasGEFN 1170..1306 CDD:214571 14/75 (19%)
RasGEF 1335..1558 CDD:238087 52/230 (23%)
Rasgrp4XP_038939950.1 REM 105..220 CDD:100121 17/83 (20%)
RasGEF 245..480 CDD:214539 51/234 (22%)
C1 586..647 CDD:412127
Blue background indicates that the domain is not in the aligned region.

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