DRSC/TRiP Functional Genomics Resources

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Protein Alignment C3G and rasgrf2

DIOPT Version :9

Sequence 1:NP_572350.2 Gene:C3G / 31618 FlyBaseID:FBgn0259228 Length:1571 Species:Drosophila melanogaster
Sequence 2:XP_002942408.2 Gene:rasgrf2 / 100486502 XenbaseID:XB-GENE-483993 Length:1232 Species:Xenopus tropicalis


Alignment Length:621 Identity:145/621 - (23%)
Similarity:259/621 - (41%) Gaps:126/621 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   991 ALPPKNYKQRKATSMVASPTLQPVI---VTTPPPSPKPTLGENGSTGRPDSRMATVCEELNDAVA 1052
            ::|.::.:...|||...|....|.:   .::|||.   :|....|..|  :|..::...||..:.
 Frog   688 SIPVRSLELFFATSQNLSDGKSPHLCRKFSSPPPL---SLSRTSSPIR--ARKLSLNSPLNSRIG 747

  Fly  1053 SEDAMPEPRSPVLDSNENVSAVDDGQTFYCHSHQLPAAEMEMSEDASSADNQPITTPQVLEEQEE 1117
            :           ||.:.:.||......|                  |.|.:.|.||.:|      
 Frog   748 A-----------LDLSTSSSASSPTSVF------------------SPATSPPPTTAKV------ 777

  Fly  1118 PTAESRPLVAVHESVKPANVDEDEEAERADMLINMLEEVNITRYLILKKREEDGPEVKGGYIDAL 1182
            |...|:.|.:..:|  |.::||:.|..|.| |.|.|.. :|.|..:|:...          :|..
 Frog   778 PLDLSKGLSSPEQS--PGSIDENSENPRID-LCNKLRR-SIRRAAVLESVS----------LDRT 828

  Fly  1183 IVHASRVQKVADNAFCEAFITTFRTFIQPIDVIEKLTHRYTYFFCQVQDNKQKAA---KETFAL- 1243
            |..:|:....|:|:.|.:..|......:|..|             |..||::..:   ...||: 
 Frog   829 IPESSQSTDTAENSPCRSPSTPRHLRYRPTGV-------------QASDNQRGCSVSPASAFAIA 880

  Fly  1244 --------------LVRVVND--LTSTDLTSQLLSLLVEFV------YQLVCSGQLYLAKLLRNK 1286
                          :.|:.:.  :.....|:::|::|..:|      ::|....::.:..||.:.
 Frog   881 TAGAGHGSPPGFNNMERICDKEFIIRRAATNRVLNVLRHWVSKHAQDFELNHEIKMNVVNLLEDV 945

  Fly  1287 FVEKVTLYKEPKVYGFVGELGGAGSVGGAGIAGSGGC----SGTAGGGNQPS---LLDLKSLEIA 1344
            ..:...|.:|.|        .....:..........|    .........||   |..|.::|:|
 Frog   946 LRDPDLLPQERK--------AATNILSALSQEEQDDCHLVLEDIINMSESPSSECLETLSAMELA 1002

  Fly  1345 EQMTLLDAELFTKIEIPEVL--LFAKDQCEEKSPNLNKFTEHFNKMSYWARSKILRLQDAKEREK 1407
            ||:||||..:|..|...|.|  .:.|....|::|.:.|.::|||.||....|:|::..|...|..
 Frog  1003 EQITLLDHIVFRSIPYQEFLGQGWMKPDKSERTPYIMKTSQHFNDMSNLVASEIMKHPDVPSRAS 1067

  Fly  1408 HVNKFIKIMKHLRKMNNYNSYLALLSALDSGPIRRLE--WQKGITEEVRSFCALID-------SS 1463
            .:.|::.:....|.|:|||..|.:.|||:...:.||:  |.| ::::.:   ||:|       |.
 Frog  1068 SIEKWVVVADICRCMHNYNGVLEITSALNRSAVYRLKKTWAK-VSKQTK---ALMDKLQKTVSSE 1128

  Fly  1464 SSFRAYRQALAETNPPCIPYIGLILQDLTFVHVGNQDYLSKGVINFSKRWQQYNIIDNMKRFKKC 1528
            ..|:..|:.|...|||.:||:|:.|.||.|:..|..::..:|::||||.....:||..:::|::.
 Frog  1129 GRFKNLRETLKNCNPPSVPYLGMYLTDLAFIEEGTPNFTEEGLVNFSKMRMISHIIREIRQFQQT 1193

  Fly  1529 AYPFRRNERIIRFFDNFKDFMGEEEMWQISEKIKPR 1564
            .|......::.:|..|....:.|:.::::|.:|:||
 Frog  1194 PYRIEHQPKVTQFLLNKSRILDEDNLYELSLRIEPR 1229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C3GNP_572350.2 RasGEFN 1170..1306 CDD:214571 25/161 (16%)
RasGEF 1335..1558 CDD:238087 71/233 (30%)
rasgrf2XP_002942408.2 PH_RasGRF1_2 19..154 CDD:270081
RhoGEF 243..424 CDD:214619
PH 488..582 CDD:365918
RasGEF_N 634..>682 CDD:366199
REM <896..967 CDD:383003 11/78 (14%)
RasGEF 993..1229 CDD:214539 73/239 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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