DRSC/TRiP Functional Genomics Resources

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Protein Alignment C3G and rasgrf2

DIOPT Version :10

Sequence 1:NP_572350.2 Gene:C3G / 31618 FlyBaseID:FBgn0259228 Length:1571 Species:Drosophila melanogaster
Sequence 2:XP_002942408.2 Gene:rasgrf2 / 100486502 XenbaseID:XB-GENE-483993 Length:1232 Species:Xenopus tropicalis


Alignment Length:621 Identity:145/621 - (23%)
Similarity:259/621 - (41%) Gaps:126/621 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   991 ALPPKNYKQRKATSMVASPTLQPVI---VTTPPPSPKPTLGENGSTGRPDSRMATVCEELNDAVA 1052
            ::|.::.:...|||...|....|.:   .::|||.   :|....|..|  :|..::...||..:.
 Frog   688 SIPVRSLELFFATSQNLSDGKSPHLCRKFSSPPPL---SLSRTSSPIR--ARKLSLNSPLNSRIG 747

  Fly  1053 SEDAMPEPRSPVLDSNENVSAVDDGQTFYCHSHQLPAAEMEMSEDASSADNQPITTPQVLEEQEE 1117
            :           ||.:.:.||......|                  |.|.:.|.||.:|      
 Frog   748 A-----------LDLSTSSSASSPTSVF------------------SPATSPPPTTAKV------ 777

  Fly  1118 PTAESRPLVAVHESVKPANVDEDEEAERADMLINMLEEVNITRYLILKKREEDGPEVKGGYIDAL 1182
            |...|:.|.:..:|  |.::||:.|..|.| |.|.|.. :|.|..:|:...          :|..
 Frog   778 PLDLSKGLSSPEQS--PGSIDENSENPRID-LCNKLRR-SIRRAAVLESVS----------LDRT 828

  Fly  1183 IVHASRVQKVADNAFCEAFITTFRTFIQPIDVIEKLTHRYTYFFCQVQDNKQKAA---KETFAL- 1243
            |..:|:....|:|:.|.:..|......:|..|             |..||::..:   ...||: 
 Frog   829 IPESSQSTDTAENSPCRSPSTPRHLRYRPTGV-------------QASDNQRGCSVSPASAFAIA 880

  Fly  1244 --------------LVRVVND--LTSTDLTSQLLSLLVEFV------YQLVCSGQLYLAKLLRNK 1286
                          :.|:.:.  :.....|:::|::|..:|      ::|....::.:..||.:.
 Frog   881 TAGAGHGSPPGFNNMERICDKEFIIRRAATNRVLNVLRHWVSKHAQDFELNHEIKMNVVNLLEDV 945

  Fly  1287 FVEKVTLYKEPKVYGFVGELGGAGSVGGAGIAGSGGC----SGTAGGGNQPS---LLDLKSLEIA 1344
            ..:...|.:|.|        .....:..........|    .........||   |..|.::|:|
 Frog   946 LRDPDLLPQERK--------AATNILSALSQEEQDDCHLVLEDIINMSESPSSECLETLSAMELA 1002

  Fly  1345 EQMTLLDAELFTKIEIPEVL--LFAKDQCEEKSPNLNKFTEHFNKMSYWARSKILRLQDAKEREK 1407
            ||:||||..:|..|...|.|  .:.|....|::|.:.|.::|||.||....|:|::..|...|..
 Frog  1003 EQITLLDHIVFRSIPYQEFLGQGWMKPDKSERTPYIMKTSQHFNDMSNLVASEIMKHPDVPSRAS 1067

  Fly  1408 HVNKFIKIMKHLRKMNNYNSYLALLSALDSGPIRRLE--WQKGITEEVRSFCALID-------SS 1463
            .:.|::.:....|.|:|||..|.:.|||:...:.||:  |.| ::::.:   ||:|       |.
 Frog  1068 SIEKWVVVADICRCMHNYNGVLEITSALNRSAVYRLKKTWAK-VSKQTK---ALMDKLQKTVSSE 1128

  Fly  1464 SSFRAYRQALAETNPPCIPYIGLILQDLTFVHVGNQDYLSKGVINFSKRWQQYNIIDNMKRFKKC 1528
            ..|:..|:.|...|||.:||:|:.|.||.|:..|..::..:|::||||.....:||..:::|::.
 Frog  1129 GRFKNLRETLKNCNPPSVPYLGMYLTDLAFIEEGTPNFTEEGLVNFSKMRMISHIIREIRQFQQT 1193

  Fly  1529 AYPFRRNERIIRFFDNFKDFMGEEEMWQISEKIKPR 1564
            .|......::.:|..|....:.|:.::::|.:|:||
 Frog  1194 PYRIEHQPKVTQFLLNKSRILDEDNLYELSLRIEPR 1229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C3GNP_572350.2 RasGEFN 1170..1306 CDD:214571 25/161 (16%)
RasGEF 1335..1558 CDD:238087 71/233 (30%)
rasgrf2XP_002942408.2 PH_RasGRF1_2 19..154 CDD:270081
RhoGEF 243..424 CDD:214619
PH 488..584 CDD:459697
RasGEF_N 634..>682 CDD:459873
REM <896..967 CDD:470601 11/78 (14%)
RasGEF 993..1229 CDD:214539 73/239 (31%)
Blue background indicates that the domain is not in the aligned region.

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