DRSC/TRiP Functional Genomics Resources

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Protein Alignment C3G and rasgrp1

DIOPT Version :9

Sequence 1:NP_572350.2 Gene:C3G / 31618 FlyBaseID:FBgn0259228 Length:1571 Species:Drosophila melanogaster
Sequence 2:NP_001093748.2 Gene:rasgrp1 / 100101791 XenbaseID:XB-GENE-489811 Length:811 Species:Xenopus tropicalis


Alignment Length:511 Identity:108/511 - (21%)
Similarity:201/511 - (39%) Gaps:97/511 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1076 DGQTFYCHSHQLPAAEMEMSEDASSADNQPITTPQVLEEQEEPTAESRPLVAVHESVKPANVDED 1140
            |..|..|.:  :|...:|:.:...|.     |.|:|     .|....|.::.:.:..|.|::|:.
 Frog    29 DRPTHGCST--IPKLALELKQIIHST-----THPKV-----PPVTPLRVMMPLGKLSKGASLDDL 81

  Fly  1141 EE--AERADMLINM-----LEEVNITRYLILKKREEDGPEVKGGYIDALIVHASRVQKVADNAFC 1198
            .:  .:..|:..||     |.::.:|.:..|....|...:::..|.|||        :....:||
 Frog    82 IQMCIQAFDLDGNMGQNSELLQIMLTMHGFLLPSTELLMKLRTLYQDAL--------QNRSFSFC 138

  Fly  1199 EAFITTFRTFIQPIDVIEKLTHRYTYFFCQVQDNKQKAAKETFALLVRVVNDLTSTDLTSQLLSL 1263
            .......|.::..:.|:.|:            |.|...|.|.|..|||...:             
 Frog   139 LRICYFIRYWVTELWVMFKM------------DAKLTQAMEEFQELVRSKGE------------- 178

  Fly  1264 LVEFVYQLVCSGQLYLAKLLRNKFVEKVTLYKEPKVYGFVGELGGAGSVGGAGIAGSGGCSGTAG 1328
              |..::|:.:.|:.     ...:..|:|...:|                        .||..  
 Frog   179 --ELHWRLIDTAQIN-----SRDWSRKLTQRIKP------------------------NCSKK-- 210

  Fly  1329 GGNQPSLL--DLKSLEIAEQMTLLDAELFTKIEIPEVLLFAKDQCEEKSPNLNKFTEHFNKMSYW 1391
              .:.|||  .|:..|:||.:|.|:.:.|.:|...:...:....|.:::|.:.:.....|.:|.|
 Frog   211 --RKVSLLFDHLEPQELAEHLTYLEFKAFRRISFSDYQNYIVSGCVKENPTMERSIALCNGISQW 273

  Fly  1392 ARSKILRLQDAKEREKHVNKFIKIMKHLRKMNNYNSYLALLSALDSGPIRRLE-----WQKGITE 1451
            .:..:|.....:.|.:.:.|||.:.:.|.::.|:|:.:|::..|....|.||:     ....:.:
 Frog   274 VQLMVLSRPTPQLRAEVLTKFIHVAQKLHQLQNFNTLMAVIGGLCHSSISRLKDTSAHVSHDVNK 338

  Fly  1452 EVRSFCALIDSSSSFRAYRQALAETNPPCIPYIGLILQDLTFVHVGNQDYLSKGVINFSKRWQQY 1516
            .:.....|:.|..::..||:...|.....||.:|:.|:||..:|....|:|....||..|....|
 Frog   339 VLNEMTELLSSCRNYDNYRRVYNECTNFKIPILGVHLKDLIALHEAMPDFLEDSKINVPKLHSLY 403

  Fly  1517 NIIDNMKRFKKCAYPFRRNERIIRFFDNFKD-FMGEEEMWQISEKIKPRGRR--PV 1569
            |.|:.:.:.:..|.|...|..::.......| :..|:||:::|...:||..|  ||
 Frog   404 NHINELIQLQNIAPPLEANMDLVHLLTLSLDLYYTEDEMYELSYAREPRNHRAPPV 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C3GNP_572350.2 RasGEFN 1170..1306 CDD:214571 23/135 (17%)
RasGEF 1335..1558 CDD:238087 55/230 (24%)
rasgrp1NP_001093748.2 REM 77..193 CDD:100121 28/155 (18%)
RasGEF 217..453 CDD:214539 55/235 (23%)
EF-hand_7 494..543 CDD:372618
C1_1 558..607 CDD:365894
BRLZ 744..799 CDD:197664
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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