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Protein Alignment shf and vwde
DIOPT Version :9
Sequence 1: | NP_001284963.1 |
Gene: | shf / 31617 |
FlyBaseID: | FBgn0003390 |
Length: | 460 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001070239.2 |
Gene: | vwde / 767804 |
ZFINID: | ZDB-GENE-060929-1226 |
Length: | 212 |
Species: | Danio rerio |
Alignment Length: | 186 |
Identity: | 67/186 - (36%) |
Similarity: | 90/186 - (48%) |
Gaps: | 11/186 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 270 DASNPTSLTTLQAPDPECSLKCGKNGYCNEHHICKCNVGYTGQYCETAFCFPQCLNGGNCTAPSV 334
|.....:|..:..|...|...|...|.|..::.|.|:.||.|:.|:.|.|:|:|.|||.|..|..
Zfish 30 DGPRGVALPFVFDPKATCDPPCKHAGICIRNNTCFCSRGYEGETCQFANCYPKCKNGGECLRPGK 94
Fly 335 CTCPEGYQGTQCEGGICKDKCLNGGKCIQ---KDKCQCSKGYYGLRCEYSKCVIPCKNEGRCIGN 396
|.||.|:.|..|...:|...|.|||:|.. :.||.|...:.|.||:.:.|...|||.|.|:..
Zfish 95 CRCPSGFGGKFCHRVVCDAGCWNGGECTAVNGEAKCICPSSWTGSRCQDAICPQGCKNGGICVAP 159
Fly 397 NLCRCPNGLRGDHCEIGRKQRSICK--CRN-GTCVSHKHCKCHPGFYGRHCNGRKR 449
.:|.||:|..|..| ..::|| |.| |.|||...|:|...|.|..|..||:
Zfish 160 GICSCPDGWIGGAC-----HTAVCKKPCVNGGKCVSPNTCRCRGLFTGPQCEERKK 210
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
shf | NP_001284963.1 |
WIF |
137..258 |
CDD:280237 |
|
vwde | NP_001070239.2 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
134 |
1.000 |
Domainoid score |
I4978 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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