DRSC/TRiP Functional Genomics Resources

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Protein Alignment shf and tenm2a

DIOPT Version :9

Sequence 1:NP_001284963.1 Gene:shf / 31617 FlyBaseID:FBgn0003390 Length:460 Species:Drosophila melanogaster
Sequence 2:XP_021336841.1 Gene:tenm2a / 563197 ZFINID:ZDB-GENE-081027-5 Length:2772 Species:Danio rerio


Alignment Length:362 Identity:89/362 - (24%)
Similarity:138/362 - (38%) Gaps:87/362 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 RVTNDLRDTTLYNFLVIPSEVNYVNFTWKSGRRKYF--------------YDF-DRLQTMDE-SI 197
            |||.::.....:..|:..::..::.|....|:...|              ||: :||...:: |:
Zfish   458 RVTQEVPPGVFWRSLMHLNQPQFLKFNISLGKDALFGVYIRKGLPPSHAQYDYMERLDGKEKWSV 522

  Fly   198 LKAPTLSIRKSGRIPQEQKNFSIFL----PCTGNSSGTASFNVGLKIQTRHNKPLSGTPIRLNFK 258
            :::|    |:...|.....|.::|:    |.|.:   .|.:|.|     :..:.:|.:...|:..
Zfish   523 VESP----RERRSIQTVVLNEAVFVQYLDPGTWH---LAFYNDG-----KEKESVSFSTAVLDSV 575

  Fly   259 KECAHR----------------GVYDIDASNPTSLTTLQA---------------PDPECSL--- 289
            :||...                |.:.:|.|..........               ..|||.:   
Zfish   576 QECPRNCHGNGECVSGVCHCFPGFHGMDCSKAACPVLCSGNGQYDKGSCICYSGWKGPECDVPIS 640

  Fly   290 -----KCGKNGYCNEHHICKCNVGYTGQYCETAFCF-PQCLNGGNCTAPSVCTCPEGYQGTQCE- 347
                 :||.:|.|.| ..|.|::||.|:.|....|. |.|.|.|.| ....|.|..|:.|..|| 
Zfish   641 QCIDPQCGGHGTCTE-GTCVCSLGYKGENCAEVDCLDPTCSNNGIC-VNGECHCKPGWGGPSCEL 703

  Fly   348 -GGICKDKCLNGGKCI-QKDKCQCSKGYYGLRCEYSKCVIPCKNEGRCIGNNLCRCPNGLRGDHC 410
             ...|.|:|...|..| ....|.|...:.|..|....|.:.|...|.|:|.: |||..|..|..|
Zfish   704 PRAQCPDQCHGHGAFIPDTGVCSCDPNWMGPDCSVEVCSVDCGTHGVCMGGS-CRCEEGWTGAAC 767

  Fly   411 EIGRKQRSICK--C-RNGTCVSHKHCKCHPGFYGRHC 444
            :    || :|.  | ::|||...| |:|..|:.|.||
Zfish   768 D----QR-VCNPLCVKHGTCKDGK-CECEQGWNGEHC 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shfNP_001284963.1 WIF 137..258 CDD:280237 24/128 (19%)
tenm2aXP_021336841.1 Ten_N 10..376 CDD:310827
EGF_2 <582..604 CDD:285248 1/21 (5%)
Keratin_B2 669..>787 CDD:330888 41/125 (33%)
EGF 812..838 CDD:306513
NHL 1212..1570 CDD:302697
NHL repeat 1241..1280 CDD:271320
NHL repeat 1286..1335 CDD:271320
NHL repeat 1358..1396 CDD:271320
NHL repeat 1414..1453 CDD:271320
NHL repeat 1476..1509 CDD:271320
NHL 1540..>1638 CDD:302697
NHL repeat 1544..1570 CDD:271320
NHL repeat 1546..1580 CDD:271320
RhsA 1656..2313 CDD:225750
RHS_repeat 1687..1723 CDD:310291
RHS_repeat 2285..2323 CDD:310291
RhsA 2397..2473 CDD:332076
Tox-GHH 2690..2765 CDD:317945
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1225
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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