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Protein Alignment shf and Tnr
DIOPT Version :9
Sequence 1: | NP_001284963.1 |
Gene: | shf / 31617 |
FlyBaseID: | FBgn0003390 |
Length: | 460 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_037177.2 |
Gene: | Tnr / 25567 |
RGDID: | 3886 |
Length: | 1358 |
Species: | Rattus norvegicus |
Alignment Length: | 166 |
Identity: | 50/166 - (30%) |
Similarity: | 67/166 - (40%) |
Gaps: | 19/166 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 285 PECSLKCGKNGYCNEHHICKCNVGYTGQYCETAFCFPQCLNGGNCTAPSVCTCPEGYQGTQCEGG 349
|.|| |...:..|...|.||.|:.|:.|...:|...|.:.|.| ....|.|...|.|..|...
Rat 173 PHCS---GHGNFSFESCGCICNEGWFGKNCSEPYCPLGCSSRGVC-VDGQCICDSEYSGDDCSEL 233
Fly 350 ICKDKCLNGGKCIQKDKCQCSKGYYGLRCEYSKCVIPCKNEGRCIGNNLCRCPNGLRGDHCEIGR 414
.|...|.:.|.|:. .:|.|.:.|.|..|...:|...|..:|:| .|..|.|..|..|:.|
Rat 234 RCPTDCSSRGLCVD-GECVCEEPYTGEDCRELRCPGDCSGKGQC-ANGTCLCQEGYAGEDC---- 292
Fly 415 KQRSICKCRNGTCVSHKHCK-----CHPGFYGRHCN 445
.|| :|.| .|....||: |..|:.|..|:
Rat 293 SQR---RCLN-ACSGRGHCQEGLCICEEGYQGPDCS 324
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1225 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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