DRSC/TRiP Functional Genomics Resources

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Protein Alignment shf and irg-7

DIOPT Version :9

Sequence 1:NP_001284963.1 Gene:shf / 31617 FlyBaseID:FBgn0003390 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_001362066.1 Gene:irg-7 / 180613 WormBaseID:WBGene00018237 Length:2217 Species:Caenorhabditis elegans


Alignment Length:143 Identity:39/143 - (27%)
Similarity:53/143 - (37%) Gaps:46/143 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 RIPQEQKNFSIFLPCTGNSSGTASFNVGLKIQTRHNKPLSGTPIRLNFKKECAHRGVYDIDASNP 274
            |:|:|...|:.|          |..|..:.:|.      :||..       ||        |.:|
 Worm   803 RVPEEVLYFNFF----------ARDNNDMALQR------AGTMF-------CA--------AVHP 836

  Fly   275 TSLTTLQAPDPECSLKCGKNGYCN-EHHICKCNVGYTGQYCETAFCFPQCLNGGNCTAPSVCTCP 338
            |       |.|:  .:|...|..| .:..|.|...:||.||:...|:    |||..:... |.||
 Worm   837 T-------PPPD--HQCQNGGVMNPSNTTCFCTPEFTGTYCQNIICY----NGGTASGDH-CVCP 887

  Fly   339 EGYQGTQCEGGIC 351
            .||.|..||...|
 Worm   888 PGYAGESCEMARC 900

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shfNP_001284963.1 WIF 137..258 CDD:280237 10/47 (21%)
irg-7NP_001362066.1 MD 181..319 CDD:214741
CLECT 1181..1313 CDD:214480
MD 1328..1469 CDD:214741
EGF_2 1474..1503 CDD:285248
VWA 2016..2194 CDD:365868
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1016037at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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