DRSC/TRiP Functional Genomics Resources

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Protein Alignment shf and C02B10.3

DIOPT Version :9

Sequence 1:NP_001284963.1 Gene:shf / 31617 FlyBaseID:FBgn0003390 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_500723.1 Gene:C02B10.3 / 177284 WormBaseID:WBGene00015328 Length:247 Species:Caenorhabditis elegans


Alignment Length:202 Identity:54/202 - (26%)
Similarity:76/202 - (37%) Gaps:61/202 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 KECAHRGVYDIDASNPTSLTTLQAPDPEC-------SLKCGKNGYCNEHHICKCNVGYTGQYC-- 314
            :||..   :.::.:||      :..:.:|       |::.||         |.||:.:.|..|  
 Worm    57 EECDR---WKLEVTNP------EYEEYKCKVLRVHASVQNGK---------CTCNINWKGPICNE 103

  Fly   315 -------ETAF---CFP-QCLNGGNCTAPS---VCTCPEGYQGTQCEGGICKDKCL--------N 357
                   ||.|   |.| .|.:.|......   .|.||..:.|..||...|..|.:        |
 Worm   104 YDGCGKGETLFGTSCTPHMCQHNGTIAVGKKEIECICPPPWDGRFCERLACWRKTISTQQHRYRN 168

  Fly   358 GGKCIQKDKCQCSKGYYGLRCEYSKCVIPCKNEGRCIGNNLCRCPNGLRGDHCEIGRKQRSICKC 422
            .|     |.|.|...|.|..|:..|   .|.|.|:.| :..|:||:|..||.|: .|.|:....|
 Worm   169 NG-----DHCICGNHYSGASCDVIK---SCLNNGQLI-DGKCKCPDGYYGDLCD-KRCQKGHVTC 223

  Fly   423 RNGTCVS 429
              .||.|
 Worm   224 --STCSS 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shfNP_001284963.1 WIF 137..258 CDD:280237
C02B10.3NP_500723.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1225
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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