DRSC/TRiP Functional Genomics Resources

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Protein Alignment shf and T16G12.10

DIOPT Version :9

Sequence 1:NP_001284963.1 Gene:shf / 31617 FlyBaseID:FBgn0003390 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_001255058.1 Gene:T16G12.10 / 13191030 WormBaseID:WBGene00044222 Length:160 Species:Caenorhabditis elegans


Alignment Length:78 Identity:28/78 - (35%)
Similarity:37/78 - (47%) Gaps:24/78 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 CGKNGYCNEHHIC---KCNV--GYTGQYCETAFCF-PQCLNG-----GNCT-----APSVCTCPE 339
            |..:..|.::.:|   ||.|  |::|:     |.| .||.||     |.|.     |||..||| 
 Worm    80 CLTDDDCGDNAVCIGRKCVVKNGFSGK-----FSFGTQCPNGYNFVDGKCEQSRHFAPSPMTCP- 138

  Fly   340 GYQGTQCEGGICK 352
              :||...||:||
 Worm   139 --KGTVWVGGVCK 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shfNP_001284963.1 WIF 137..258 CDD:280237
T16G12.10NP_001255058.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1225
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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