DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shf and wif1

DIOPT Version :10

Sequence 1:NP_001284963.1 Gene:shf / 31617 FlyBaseID:FBgn0003390 Length:460 Species:Drosophila melanogaster
Sequence 2:NP_001106386.1 Gene:wif1 / 100127197 XenbaseID:XB-GENE-486515 Length:374 Species:Xenopus tropicalis


Alignment Length:342 Identity:115/342 - (33%)
Similarity:174/342 - (50%) Gaps:40/342 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 EESGISLWINEQQLKMLTALYFPQGYSERLYAIHNSRV---TNDLRDTTLYNFLVIPSEVNYVNF 174
            :|..:.:||:..|.::|.      |:.|.:..:...::   |:|.|... .....||..::.:||
 Frog    27 QEDSLYMWIDAHQARVLI------GFEEDILIVSEGKMAPFTHDFRKAQ-QRMPAIPVNIHAMNF 84

  Fly   175 TWK-SGRRKYFYDFDRLQTMDESILKAPTLSIRKSGRIPQEQKNFSIFLPCTGNSSGTASFNVGL 238
            ||: :|:.:|||:|..|:::|:.|:..||:::...|.:|.:.....:..||.||..|.|:|.|.:
 Frog    85 TWQATGQAEYFYEFLSLRSLDKGIMADPTVNVPLLGTVPHKATVVQVGFPCLGNQDGVAAFEVNV 149

  Fly   239 KIQTRHNKPLSGTPIRLNFKKECAHRGVYDIDASNPTSLTTLQAPDPECSLKCGKNGYCNEHHIC 303
            .:.......:..||....|.|.|.                  ||   :|...|...|:||:.|:|
 Frog   150 IVMNSEGNVILQTPQNAIFFKTCQ------------------QA---KCPGGCRNGGFCNDRHVC 193

  Fly   304 KCNVGYTGQYCETAFCFPQCLNGGNCTAPSVCTCPEGYQGTQCEGGICKDKCLNGGKCIQKDKCQ 368
            :|..|:.|.:||.|.|.|:|:|||.|..|.:|.||.||.|..|:...|...|||||.|....||.
 Frog   194 ECPDGFYGPHCEKALCMPRCMNGGLCVTPGLCICPPGYYGINCDKVNCTTHCLNGGTCFYPGKCI 258

  Fly   369 CSKGYYGLRCEYSKCVIPCKNEGRCIGNNLCRCPNGLRGDHCEIGRKQRSICK--C-RNGTCVSH 430
            |..||.|.:||.|||..||:|.|:|.|.|.|:|..|.:||.|     .:.:|:  | .:|||:..
 Frog   259 CPSGYEGEQCETSKCQQPCRNGGKCSGRNKCKCSKGYQGDLC-----SKPVCEPSCGSHGTCIEP 318

  Fly   431 KHCKCHPGFYGRHCNGR 447
            ..|:|..|:.||:||.|
 Frog   319 NKCQCKEGWNGRYCNKR 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shfNP_001284963.1 WIF 120..258 CDD:470637 37/141 (26%)
wif1NP_001106386.1 WIF 30..174 CDD:470637 40/168 (24%)

Return to query results.
Submit another query.