DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14439 and spin-4

DIOPT Version :9

Sequence 1:NP_001188550.1 Gene:CG14439 / 31614 FlyBaseID:FBgn0029898 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001380236.1 Gene:spin-4 / 190952 WormBaseID:WBGene00013739 Length:512 Species:Caenorhabditis elegans


Alignment Length:571 Identity:110/571 - (19%)
Similarity:208/571 - (36%) Gaps:147/571 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IPILEKLSGFYNTYVLAVLTIGYILGELGHY-LIGVTSKQTAIELDYGDHACQQNTSMFNRHELP 65
            :.:..:|:|.......::|.:..:|..:..| ::||.|:....                      
 Worm    11 LDVASRLAGKKKWVTCSILLLVNLLNYMDRYTIVGVMSRLATF---------------------- 53

  Fly    66 TQCSAVMNETSCYALDFNGTGYCEWNYNGLGIDYQILAGPTFILIFTIAGVFMGFAADKYNRVNM 130
                        :.:|..|.|               |....||:.:.......|:..|:|||..:
 Worm    54 ------------FDIDDKGQG---------------LLQTVFIVFYMFFAPLFGYLGDRYNRKML 91

  Fly   131 LTVCTVIFGIAMILQGTVKE--YWQLVILRMIMAAGESGCNPLATGIMSDIFPEDKRALVMAIFN 193
            :.....|:.:|:.......|  |:..::.|.|:..||:..:.:|..::||:|....|:.|:.:|.
 Worm    92 MITGICIWILAVFASSFCGEGHYYLFLLCRGIVGIGEASYSTIAPTVLSDLFSGGLRSRVLMMFY 156

  Fly   194 WGIYGGYGIAFPVGRYITK-LNFWNLGWRVCYLGAGVLTVIMAALTGTTLREPERKAIGEGDRQT 257
            :.|..|.|:.|..|..|:: .:.|..|.|.    :.::.:....|....|.||.|.|. :|.|| 
 Worm   157 FAIPVGSGLGFISGSSISQATDSWQWGVRF----SPIIGIACLGLMLWLLDEPVRGAC-DGARQ- 215

  Fly   258 SSGKPVSLWQVIKNPAMI---MLMIAASIRHCGGMTFAYNADLYYNTYFPDVDLGWW-------- 311
             :|....|...||....|   .|..||||.                ::|....:.||        
 Worm   216 -NGDEADLIGDIKYLMSIKTFYLASAASIA----------------SFFSIGTMSWWTPQYVGFS 263

  Fly   312 --------------------LFG-VTIGIGSVGVVVGGIVSDKIVAKMGI-------RSRAFVLA 348
                                :|| :|...|.:||..|.|:|........|       ::..::.|
 Worm   264 YAVIHNVPKVPETELTQINLIFGIITCMAGLLGVATGSILSRAWRDGSSIFRNHATEKADVYICA 328

  Fly   349 VSQLIATLPAFGSVYFDPLWAMITLGLSYFFAEMWFGIVFAIVVEIVPLRV----RSSTIGVFLF 409
            :|..:| ||......|...::.....:..:||.|...:.:::.|:::...|    |::.:.|...
 Worm   329 LSMFVA-LPFLFFAIFIAEYSTNGCLILIYFAIMSMCLNWSVNVDVLMYVVVANRRATALAVQTM 392

  Fly   410 VMNNIG-GNLPILVDPVAKILGYRGSIMIFYAGFYGISSIL------------FFI--TCFLLEG 459
            |.:..| ...|.::..::.:|  ||........|:.:...|            |::  |.|:.:.
 Worm   393 VAHLFGDAASPYIIGVLSDML--RGDDASAVGHFFALQKALYVPTFMLVVAGAFYLAATFFVEDD 455

  Fly   460 KPDEVGQPESPKS--HPDAVLNARHMHGHDN--SVFSVDETLPSNGRPAQL 506
            :.:.:.|.::|.:  |.|...:...:..|:|  :|..|:|      .||.:
 Worm   456 RKEALYQMDAPDNWHHDDPSEDLDDLLSHENPETVEGVEE------HPADM 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14439NP_001188550.1 MFS_1 94..416 CDD:284993 79/368 (21%)
MFS 107..452 CDD:119392 85/403 (21%)
spin-4NP_001380236.1 MFS_spinster_like 28..446 CDD:340886 95/492 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1330
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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