DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL17 and LOC499522

DIOPT Version :9

Sequence 1:NP_001284961.1 Gene:RpL17 / 31613 FlyBaseID:FBgn0029897 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_038959220.1 Gene:LOC499522 / 499522 RGDID:1594381 Length:184 Species:Rattus norvegicus


Alignment Length:179 Identity:119/179 - (66%)
Similarity:144/179 - (80%) Gaps:0/179 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPFRRFNG 65
            |.|||.:.:|..||||:||.||||||.||.|||||||.|.:|:|.:|||.|..:|:||||..:||
  Rat     1 MVRYSLDPENPTKSCKSRGSNLRVHFMNTLETAQAIKGMHIRKATKYLKDVTLKKQCVPFWLYNG 65

  Fly    66 GVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLRRRTY 130
            |||||||||||..|||||.||||||||.:|:|||:||:.||||.|.||:.|||||:...:|||||
  Rat    66 GVGRCAQAKQWGWTQGRWAKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKVPKMRRRTY 130

  Fly   131 RAHGRINPYMSSPCHVEVILTEKEELVSKATDDEPAKKKLSKKKLQRQK 179
            |||.|||||||||||.|:||||||::|.|..::...|||:|:|||::||
  Rat   131 RAHSRINPYMSSPCHTEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQK 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL17NP_001284961.1 PTZ00178 1..162 CDD:240306 110/160 (69%)
LOC499522XP_038959220.1 PTZ00178 1..165 CDD:240306 110/163 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H133871
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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