DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL17 and rpl17

DIOPT Version :9

Sequence 1:NP_001284961.1 Gene:RpL17 / 31613 FlyBaseID:FBgn0029897 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001229966.1 Gene:rpl17 / 336641 ZFINID:ZDB-GENE-030131-8585 Length:184 Species:Danio rerio


Alignment Length:179 Identity:124/179 - (69%)
Similarity:150/179 - (83%) Gaps:0/179 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPFRRFNG 65
            |.|||.:.:|..||||:||.|||||||||.|||||||.|.:|:|.:|||.||.:.:||||||:||
Zfish     1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKANKYLKDVIVKHQCVPFRRYNG 65

  Fly    66 GVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLRRRTY 130
            ||||||||||...||||||||||||||.:|:|||:||:.||||.|.||:.|||||:|..:|||||
Zfish    66 GVGRCAQAKQHDWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTY 130

  Fly   131 RAHGRINPYMSSPCHVEVILTEKEELVSKATDDEPAKKKLSKKKLQRQK 179
            |||||||||||||||:|:||||||::|.|..::...|||:|:|||::||
Zfish   131 RAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVSQKKKVSQKKLKKQK 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL17NP_001284961.1 PTZ00178 1..162 CDD:240306 115/160 (72%)
rpl17NP_001229966.1 PTZ00178 1..163 CDD:240306 115/161 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578372
Domainoid 1 1.000 215 1.000 Domainoid score I2673
eggNOG 1 0.900 - - E1_COG0091
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H133871
Inparanoid 1 1.050 260 1.000 Inparanoid score I3112
OMA 1 1.010 - - QHG62162
OrthoDB 1 1.010 - - D1362349at2759
OrthoFinder 1 1.000 - - FOG0001699
OrthoInspector 1 1.000 - - oto40681
orthoMCL 1 0.900 - - OOG6_100758
Panther 1 1.100 - - LDO PTHR11593
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2754
SonicParanoid 1 1.000 - - X1092
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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