DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL17 and mrpl-22

DIOPT Version :10

Sequence 1:NP_572346.1 Gene:RpL17 / 31613 FlyBaseID:FBgn0029897 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_499340.1 Gene:mrpl-22 / 176482 WormBaseID:WBGene00012645 Length:260 Species:Caenorhabditis elegans


Alignment Length:129 Identity:26/129 - (20%)
Similarity:39/129 - (30%) Gaps:44/129 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KAVIDQKECVPFRRFNGGVGRCAQAKQWKTTQGRWPK--------------KSAEFLLQLLRNAE 99
            |.|...||.|.|          :..:.|...|..|..              |:...|:..::.|:
 Worm   116 KEVFHCKESVHF----------SPKRMWAACQLVWKMNVDEAITQLDMQQLKACNLLMDTIKKAK 170

  Fly   100 ANADCKGLDADRLVVHH-----------IQVNRAQCLRRRTYRAHGRINPYMSSPCHVEVILTE 152
            :.|      ||...:.:           :|.|..:..||   .||...|.......|:.|.|.|
 Worm   171 SRA------ADEFHIEYPSQMYVADAFPVQSNIVKGARR---HAHDNWNTIRYRYIHIFVRLEE 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL17NP_572346.1 PTZ00178 1..162 CDD:240306 26/129 (20%)
mrpl-22NP_499340.1 Ribosomal_L22 125..224 CDD:459725 20/117 (17%)

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