DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3168 and NiaP

DIOPT Version :9

Sequence 1:NP_001284957.1 Gene:CG3168 / 31612 FlyBaseID:FBgn0029896 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001326466.1 Gene:NiaP / 820491 AraportID:AT3G13050 Length:500 Species:Arabidopsis thaliana


Alignment Length:524 Identity:152/524 - (29%)
Similarity:256/524 - (48%) Gaps:79/524 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 ERAIELCGYGKFHYILLAICGLVSTSEEMDVISMSFILPSAECDLDLNTETKGWLNSIIFIGMMV 202
            :.|:...|:|||...:||..|:...:|.|:::.:||:.|:.:...:|:...:..:.|::|.||::
plant    11 DEALVAMGFGKFQIYVLAYAGMGWVAEAMEMMLLSFVGPAVQSLWNLSARQESLITSVVFAGMLI 75

  Fly   203 GAYFWGSIADSFGRKK---VLIVISFMNAFCIVASSFSQTYSFFMLFRFLNGAALGGSGPVIWSY 264
            |||.||.::|..||:|   :..|::|:..|   .|:||..|.:.::.|.|.|..||| |||:.|:
plant    76 GAYSWGIVSDKHGRRKGFIITAVVTFVAGF---LSAFSPNYMWLIILRCLVGLGLGG-GPVLASW 136

  Fly   265 FAEFQPKAKRGSMLSFMAAFWTFGNLFVASLAWLIIPRTIGFTTPYFTYNSWRIFLLVCSLPSFL 329
            :.||.|...||:.:...:||||.|.:|.||||||::||.           .||..|...|:||.|
plant   137 YLEFIPAPSRGTWMVVFSAFWTVGTIFEASLAWLVMPRL-----------GWRWLLAFSSVPSSL 190

  Fly   330 VGFLLFY--LPESPKFLLTRGKKDRALAIFRGIFVTNTKRRPDEYMVYDLEVDEKLLESNGNVKN 392
            :  ||||  ..|||::|:.:|:|..||||...|...|..:.|...:..:||.:   ||.|.|:..
plant   191 L--LLFYRWTSESPRYLILQGRKAEALAILEKIARMNKTQLPPGVLSSELETE---LEENKNIPT 250

  Fly   393 KYSRMI----SG-MVDHSRALFK-------------SP-ILRFTIVSITINFTFHIGYYGLLMWF 438
            :.:.::    || .|..|:.:.|             || :::.|::...:.|.....|||:::..
plant   251 ENTHLLKAGESGEAVAVSKIVLKADKEPGFSLLALLSPTLMKRTLLLWVVFFGNAFAYYGVVLLT 315

  Fly   439 PELFNRFEEYEKAFPDQSAGVCAVTDYVVNLAKEQSNNGTCSSDIP-QSVFMESLISLASALPAN 502
            .||.|   .:.:.:|                .::|..|   |:|:. :.||:.|.    :..|..
plant   316 TELNN---SHNRCYP----------------TEKQLRN---SNDVNYRDVFIASF----AEFPGL 354

  Fly   503 LLAILGMDMLGRKFFLIAGTMTAGICSALMYFVRSSVQNLVVSAIFSG--AISAANAALDCLITE 565
            |::...:|.||||..:.:...|.  |..|:..:......:....:|.|  .||||...:.....|
plant   355 LISAAMVDRLGRKASMASMLFTC--CIFLLPLLSHQSPFITTVLLFGGRICISAAFTVVYIYAPE 417

  Fly   566 VFPTKLRATGVAISMVAARLGGIIGNIVIAQLLDNYCPSPTFIV---SGLLIGGGLMCLLLPNTT 627
            ::||.:|.|||.:.....|:|||:..:|...|:.. |.....::   ..:|:.|..:||....|:
plant   418 IYPTAVRTTGVGVGSSVGRIGGILCPLVAVGLVHG-CHQTIAVLLFEVVILVSGICVCLFPFETS 481

  Fly   628 RKEL 631
            .::|
plant   482 GRDL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3168NP_001284957.1 2A0115 149..598 CDD:273327 140/475 (29%)
MFS 154..623 CDD:119392 145/498 (29%)
NiaPNP_001326466.1 MFS 27..476 CDD:421695 144/497 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59613
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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