DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3168 and svopa

DIOPT Version :9

Sequence 1:NP_001284957.1 Gene:CG3168 / 31612 FlyBaseID:FBgn0029896 Length:632 Species:Drosophila melanogaster
Sequence 2:XP_005165254.1 Gene:svopa / 559162 ZFINID:ZDB-GENE-060526-336 Length:549 Species:Danio rerio


Alignment Length:520 Identity:138/520 - (26%)
Similarity:228/520 - (43%) Gaps:96/520 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 KGGKGRKKSVPLPEPTAPIVANF----------ERAIELCGYGKFHYILLAICGLVSTSEEMDVI 169
            :||:...:||.|.: .||:...|          |.|:|..|:|.|.:.|..:.||...::.|:::
Zfish    39 EGGRTDMESVSLAD-GAPVPREFANPTDDTFMVEDAVEAIGFGTFQWKLSILTGLSWMADAMEMM 102

  Fly   170 SMSFILPSAECDLDLNTETKGWLNSIIFIGMMVGAYFWGSIADSFGRKKVLIVISFMNAFCIVAS 234
            .:|.:.|...|:..|.:.....|.|::|||||:.:..||:|:|.:|||..|.:......|..:.|
Zfish   103 ILSILAPQLHCEWALPSWEVALLTSVVFIGMMISSSLWGNISDKYGRKTGLKMSVLWTLFYGILS 167

  Fly   235 SFSQTYSFFMLFRFLNGAALGGSGPVIWSYFAEFQPKAKRGSMLSFMAAFWTFGNLFVASLAWLI 299
            :|:..|.:.:..|.|.|..:||: |...:.:|||.|...|.:.:..:..||..|.:|...||.|:
Zfish   168 AFAPIYGWILFLRALVGFGIGGA-PQSVTLYAEFLPMRSRATCILLIEIFWALGTVFEVLLAILV 231

  Fly   300 IPRTIGFTTPYFTYNSWRIFLLVCSLPSFLVGFLLFYLPESPKFLLTRGKKDRALAIFRGIFVTN 364
            :| |:|          ||..|.:.::|.|:..||.|:||||.::.:..|.:::||...:.|...|
Zfish   232 MP-TLG----------WRWLLALSTIPLFIFAFLCFWLPESARYDVLTGNQEKALNTLKRIAAEN 285

  Fly   365 TKRRPDEYMVYDLEVDEKLLESNGNVKNKYSRMISGMVDHSRALFKSPILRFTIVSI-TINFTFH 428
            ....|...::...:      |..|.:::.:                ||..|:|.|.: .|.|:..
Zfish   286 NVPMPLGKLIVARQ------EDRGKIQDLF----------------SPHFRWTTVLLWFIWFSNA 328

  Fly   429 IGYYGLLMWFPELFNRFEEYEKAFPDQSAGVCAVTDYVVNLAKEQSNNGTCSSD---IPQSVFME 490
            ..|||:::...|||            |..|||..       ||.......||.:   :....:.:
Zfish   329 FSYYGVVLLTTELF------------QEGGVCGG-------AKGSKMEPGCSLECKYLNSDDYKD 374

  Fly   491 SLISLASALPANLLAILGMDMLGRK------FFLIAGTMTAGICSALMYFV--RSS--VQNLVVS 545
            .|.:..|..|..|:.:..:|.|||:      ||:.:      :|...:|..  |:|  |...:..
Zfish   375 LLWTTLSEFPGLLVTLWAIDRLGRRKTMALCFFVFS------LCIVPLYSCVGRTSLTVFIFIAR 433

  Fly   546 AIFSGAISAANAALDCLITEVFPTKLRATGVAISMVAARLGGIIGNIVIAQLLDN--------YC 602
            |..:|...||..    ...||:||..||.|:..|...||:|.:|...|...:|::        ||
Zfish   434 AFIAGGFQAAYV----YTPEVYPTATRALGLGTSSGMARVGALITPFVAQVMLESSVYLTLSVYC 494

  Fly   603  602
            Zfish   495  494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3168NP_001284957.1 2A0115 149..598 CDD:273327 122/462 (26%)
MFS 154..623 CDD:119392 123/471 (26%)
svopaXP_005165254.1 2A0115 82..482 CDD:273327 122/462 (26%)
MFS 88..508 CDD:119392 123/470 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59613
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.050

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