DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3168 and Slc22a28

DIOPT Version :9

Sequence 1:NP_001284957.1 Gene:CG3168 / 31612 FlyBaseID:FBgn0029896 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001013842.2 Gene:Slc22a28 / 434674 MGIID:3645714 Length:552 Species:Mus musculus


Alignment Length:538 Identity:119/538 - (22%)
Similarity:207/538 - (38%) Gaps:130/538 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 PIVANFERAIELC-GYGKFHYILLAICGLVSTSEEMD--------VISMSFILPSAECDLDLNTE 187
            |:.:|..  ::.| .:.:..:.||.:.|..|...|.|        |...|..|.:...:.||..|
Mouse    78 PLDSNLR--LDKCRRFAQPQWHLLHLNGTFSNETEPDTEPCVDGWVYDRSNFLSTIVTEWDLVCE 140

  Fly   188 TKGWLNSI----IFIGMMVGAYFWGSIADSFGRKKVLIVISFMNAFCIVASSFSQTYSFFMLFRF 248
            ::. |||:    ..||:.:||...|.::|.||||.:|.......|......:|:.::..:.|.||
Mouse   141 SQA-LNSVAKFSFMIGLFIGAIICGHLSDRFGRKFILTCALLQFAITETCVAFAPSFFIYCLLRF 204

  Fly   249 LNGAALGGSGPVIWSYFAEFQPKAKRGSMLSFMAAFWT----FGNLFV-----ASLAWLIIPRTI 304
            |.|.::              :|.:...::|...   ||    .|.:.|     ||:.::|:   .
Mouse   205 LAGMSV--------------EPISVNSNLLILE---WTNPKFLGMVAVLTSCAASIGYMIL---A 249

  Fly   305 GFTTPYFTYNSWRIFLLVCSLPSFLVGFLLFYLPESPKFLLTRGKKDRALAIFRGIFVTNTKRRP 369
            |..   |.:..|....|..|:|.|....|..::.||.::|:...|..:.|...|.:...|..:..
Mouse   250 GLA---FLFRIWHHLQLAMSVPIFFFFILTRWMSESARWLIVTNKPQKGLKELRKVAHMNGMKNS 311

  Fly   370 DEYMVYDLEVDEKLLESNGNVKNKYSRMISGMVDHSRALFKSPILRFTIVSIT-INFTFHIGYYG 433
            ...:.  :||.|..:::......:.|        ..|.||.:||||..|..:: :.:.|.:..:|
Mouse   312 GNTLT--MEVVEASMKNELEAAKRKS--------SPRDLFHTPILRNRICVLSFMRYLFTVSIFG 366

  Fly   434 LLMWFPELFNRFEEYEKAFPDQSAGVCAVTDYVVNLAKEQSNNGTCSSDIPQSVFMESLISLASA 498
            |.:....|                                      |::|....|:.|.:.:   
Mouse   367 LSLHLQHL--------------------------------------STNIILLRFLSSALGI--- 390

  Fly   499 LPANLLAILG---MDMLGRKFFLIAGTMTAGICSALMYFVRSSVQNLVVSAIFSGAISAANAALD 560
                |::::|   ::.:||:...:......||......||...:|.|.:..:   .::||.::| 
Mouse   391 ----LISVIGHFVLNHMGRRITQLVLMSLRGIFMLTAVFVPQEMQTLRIIVV---TLAAALSSL- 447

  Fly   561 CL------ITEVFPTKLRATGVAISMVAARLGGIIGN--IVIA---QLLDNYCPS-PTFIVSGLL 613
            |:      |.|:.||.|||||:.:.       |:.||  :.:|   .||..|..: |.....|..
Mouse   448 CMCVSNLHINELLPTTLRATGMGVI-------GMFGNSGLFLAPLFMLLATYSANLPWIFYGGFS 505

  Fly   614 IGGGLMCLLLPNTTRKEL 631
            |..|....|||.|..:.|
Mouse   506 ILYGFSVFLLPETKNQPL 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3168NP_001284957.1 2A0115 149..598 CDD:273327 104/484 (21%)
MFS 154..623 CDD:119392 110/505 (22%)
Slc22a28NP_001013842.2 2A0119 11..525 CDD:273328 119/538 (22%)
MFS 151..516 CDD:119392 97/453 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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