DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3168 and CG6006

DIOPT Version :9

Sequence 1:NP_001284957.1 Gene:CG3168 / 31612 FlyBaseID:FBgn0029896 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster


Alignment Length:618 Identity:127/618 - (20%)
Similarity:222/618 - (35%) Gaps:197/618 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 KKSVPLPEPTAPIVANFERAI---------ELCG-YGKFHYILLAICGL--------VSTS---- 163
            |:....|:..|..|:..:.|.         :|.| |||:..::..:..|        :|:|    
  Fly    57 KQQAATPQSPAAAVSGLDPADDEDETDVIGDLMGHYGKWQLLMTVLLSLFQVPNTFHISSSIYQA 121

  Fly   164 -------------EEMDV-----------------------ISMSFILPS-----AECDLDL--- 184
                         :.|.|                       :|....|||     ||.|..|   
  Fly   122 ANKDFWCQRPAQLQHMPVATWRNLSGSVDNCRRWEGIDWSQVSNETTLPSDWKTPAEMDKKLVAC 186

  Fly   185 ------------NTETKGW--------LNSI----IFIGMMVGAYFWGSIADSFGRKKVLIVISF 225
                        ||.|..|        |.::    ..:|:..|....|.::|.||||.:|.:.:.
  Fly   187 EKWEYETNDNVGNTWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAV 251

  Fly   226 MNA----FCIVASSFSQTYSFFMLFRFLNG---AALGGSGPVIWSYFAEFQPKAKRGSMLSFMAA 283
            :..    :..:.|||    ..::..|.|.|   .::..||.::...:.:.:.:...|..      
  Fly   252 LQTIFGLWLYICSSF----ELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMY------ 306

  Fly   284 FWTFGNLFVASLAWLIIPRTIGFTTPYFTYNSWRIFLLVCSLPSFLVGFLLFYLPESPKFLLTRG 348
                 |||...::::||.   |..  |.|.:..|:.|.: .:|...:.||.|.:||||::||.:|
  Fly   307 -----NLFPLPISYMIIS---GLA--YLTQDYQRLQLCI-GIPGIFLCFLWFVVPESPRWLLVKG 360

  Fly   349 KKDRALAIFRGIFVTNTKRRPDEYMVYDLEVDEKLLESNGNVKNKYSRMISGMVDHSRALFKSPI 413
            :.|....|.......|.::.|.:|     ::.....||:              ......||:|..
  Fly   361 RIDEVRRIIEAAAKFNGRQLPADY-----QLTPPTQESS--------------TQDVTYLFRSSY 406

  Fly   414 L-RFTIVSITINFTFHIGYYGLLMWFPELFNRFEEYEKAFPDQSAGVCAVTDYVVNLAKEQSNNG 477
            | |.:|....|.||.::.|||:                               ::|::....|  
  Fly   407 LRRISICFFCIWFTMNLVYYGI-------------------------------ILNMSSFGGN-- 438

  Fly   478 TCSSDIPQSVFMESLISLASALPANLLAILGMDMLGRKFFLIAGTMTAGI--CSALMYFVRSSVQ 540
                     |::.|.::....:||..:|:..:..:|:|:...|..:.||:  |.|.:....:.:.
  Fly   439 ---------VYLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATLICAGVACCCAAITEGHADLL 494

  Fly   541 NLVVSAIFSG--AISAANAALDCLITEVFPTKLRATGVAISMVAARLGGIIG------NIVIAQL 597
            .|.::.:..|  .|||.|..:.....|::||.:|..||....|||.|..|:.      |.:...|
  Fly   495 WLKITFLMMGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHL 559

  Fly   598 LDNYCPSPTFIVSGLLIGGGLMCLLLPNTTRKE 630
            |       ..:::...|.||.:.|.||.|..::
  Fly   560 L-------MTLLTAWSIFGGFVVLFLPETAVRQ 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3168NP_001284957.1 2A0115 149..598 CDD:273327 108/546 (20%)
MFS 154..623 CDD:119392 114/566 (20%)
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 120/579 (21%)
MFS 222..579 CDD:119392 96/445 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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