DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3168 and slc22a4

DIOPT Version :9

Sequence 1:NP_001284957.1 Gene:CG3168 / 31612 FlyBaseID:FBgn0029896 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_957143.1 Gene:slc22a4 / 393822 ZFINID:ZDB-GENE-040426-1517 Length:553 Species:Danio rerio


Alignment Length:460 Identity:108/460 - (23%)
Similarity:189/460 - (41%) Gaps:80/460 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 ECDLDLNTETKGWL-NSIIFIGMMVGAYFWGSIADSFGRKKVLIVISFMNAFCIVASSFSQTYSF 242
            |.||....|.||.| :||.|.|::||.:..|.::|.:||:.||..:..:....|:...||.::..
Zfish   131 EWDLVCEREYKGPLTSSIYFCGVLVGTFLSGQMSDRYGRRPVLFTMMALQTITILIQMFSPSWEV 195

  Fly   243 FMLFRFLNGAALGGSGPVIWSYFAEFQPKAKR---GSMLSFMAAFWTFGNLFVASLAWLIIPRTI 304
            |....|..|.:...:..|.:...:|....|.|   ||:..||.:  ..|.:|....|:.|     
Zfish   196 FSAIYFFVGFSGFSNYVVAYVLGSEILSPASRVLFGSLGVFMGS--GIGQMFFPLAAYFI----- 253

  Fly   305 GFTTPYFTYNSWRIFLLVCSLPSFLVGFLLFYLPESPKFLLTRGKKDRALAIFRGIFVTNTKRRP 369
                     .|||..:|..:|...|...|.:::||||::||::|:...|.|:.|.....|....|
Zfish   254 ---------RSWRWLVLTNALTGLLYFPLWWFIPESPRWLLSQGRTAEAEAVLRRAAEKNRVTAP 309

  Fly   370 DEYMVYDLEVDEKLLESNGNVKNKYSRMISGMVDHSRALFKSPILRFTIVSITINFTFHIGYYGL 434
             |.:....|::|      ...|......|..::.:..|:  |.||..:::.:.|.    :.||.|
Zfish   310 -EVIFSSSEIEE------AAKKRIQKHSILDILSNCNAV--STILICSLLWMVIT----MSYYAL 361

  Fly   435 LMWFPELFNRFEEYEKAFPDQSAGVCAVTDYVVNLAKEQSNNGTCSSDIPQSVFMESLISLASAL 499
            ::                                       |.|   ::..:.::...:|....:
Zfish   362 IL---------------------------------------NTT---NLHGNPYLNFFLSAVVEV 384

  Fly   500 PANLLAILGMDMLGRKFFLIAGTMTAGICSALMYFVRSSVQNLVVSAIFSG--AISAANAALDCL 562
            ||.::|.|.:....|:....:..:..|....::..:.:.:|.|..:....|  .::||...:..:
Zfish   385 PAYIIAALLLRFCSRRICQASTLLLGGALIFIIQLIPTELQGLATALEMLGKLCVTAAFCVVYAV 449

  Fly   563 ITEVFPTKLRATGVAISMVAARLGGIIGNIVIAQLLDNYCP-SPTFIVSGLLIGGGLMCLLLPNT 626
            .:|:|||.:|...:....:.||:|.||...:|  .|.||.. .|..::.||.:..|:|.||||.:
Zfish   450 TSELFPTVVRNMAMGSCSMTARIGSIISPFII--YLGNYYRYIPYIVIGGLALFSGVMSLLLPES 512

  Fly   627 TRKEL 631
            ..|.|
Zfish   513 KGKVL 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3168NP_001284957.1 2A0115 149..598 CDD:273327 94/424 (22%)
MFS 154..623 CDD:119392 103/450 (23%)
slc22a4NP_957143.1 2A0119 12..520 CDD:273328 108/460 (23%)
MFS 144..510 CDD:119392 98/438 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.