DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3168 and Slc22a20

DIOPT Version :9

Sequence 1:NP_001284957.1 Gene:CG3168 / 31612 FlyBaseID:FBgn0029896 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_941052.1 Gene:Slc22a20 / 381203 MGIID:2685809 Length:556 Species:Mus musculus


Alignment Length:465 Identity:120/465 - (25%)
Similarity:206/465 - (44%) Gaps:90/465 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 ILPSA---ECDLDLNTET-KGWLNSIIFIGMMVGAYFWGSIADSFGRKKVLIVISFMNAFCIVAS 234
            |.||.   |.||.....| :....||...|::|||..:|.:||..|||..|:......|....|:
Mouse   117 IFPSTIVMEWDLVCEARTLRDLAQSIYMSGVLVGAALFGGLADRLGRKAPLVWSYLQLAVSGAAT 181

  Fly   235 SFSQTYSFFMLFRFLNGAALGGSGPVIWSYFAEFQPKAKR---GSMLSFMAAFWTFGNLFVASLA 296
            ::..::|.:.:||||.|....|......|...|:.|...|   |.:|.|.   :|.|.|.:|.:|
Mouse   182 AYVGSFSAYCVFRFLMGMTFSGIILNSLSLVVEWMPTRGRTVAGILLGFS---FTLGQLILAGVA 243

  Fly   297 WLIIPRTIGFTTPYFTYNSWRIFLLVCSLPSFLVGFLL-FYLPESPKFLLTRGKKDRALAIFRGI 360
            :||.|              ||......|.| |||.||. ::||||.::||..||..:|:...:.:
Mouse   244 YLIRP--------------WRWLQFAVSAP-FLVFFLYSWWLPESSRWLLLHGKAQQAVQNLQKV 293

  Fly   361 FVTNTKRRPDEYMVYDLEVDEKLLESNGNVKNKYSRMISGMVDHSRALFKSP-ILRFTIVSITIN 424
            .:.|.::...|.:..:: |...:.:...:|:...|     ::|    ||::| |.|.|...:.:.
Mouse   294 AMMNGRKAEGERLTTEV-VSSYIQDEFASVRTSNS-----ILD----LFRTPAIRRVTCCLMGVW 348

  Fly   425 FTFHIGYYGLLMWFPELFNRFEEYEKAFPDQSAGVCAVTDYVVNLAKEQSNNGTCSSDIPQSVFM 489
            |:..:.||||.|          :.:|         ..::.|:|                 |::| 
Mouse   349 FSNSVAYYGLAM----------DLQK---------FGLSIYLV-----------------QALF- 376

  Fly   490 ESLISLASALPANLLAILGMDMLGRKFFLIAGTMTAGICSALMYFVRSSVQNL--VVSAIFSGAI 552
             .:|.    :||.|:|...|..:||:..:.:..:.||:......|:...:|.|  |.:|:..|.:
Mouse   377 -GIID----IPAMLVATTTMIYVGRRATVSSFLILAGLMVIANMFMPEDLQTLRTVQAALGKGCL 436

  Fly   553 SAANAALDCLITEVFPTKLRATGVAISMVAARLGGIIGNIV-----IAQLLDNYCPSPTFIVSGL 612
            :::...:.....|::||::|..|:..:.|.|||||::..::     |:.:|    |..:|..:.:
Mouse   437 ASSFICVYLFTGELYPTEIRQMGMGFASVNARLGGLVAPLITTLGEISPVL----PPVSFGATSV 497

  Fly   613 LIGGGLMCLL 622
            |.|..:.|.|
Mouse   498 LAGMAVACFL 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3168NP_001284957.1 2A0115 149..598 CDD:273327 113/439 (26%)
MFS 154..623 CDD:119392 120/465 (26%)
Slc22a20NP_941052.1 2A0119 11..518 CDD:273328 120/465 (26%)
MFS 138..507 CDD:119392 112/442 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 526..556
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.