DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3168 and CarT

DIOPT Version :9

Sequence 1:NP_001284957.1 Gene:CG3168 / 31612 FlyBaseID:FBgn0029896 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster


Alignment Length:555 Identity:116/555 - (20%)
Similarity:208/555 - (37%) Gaps:135/555 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 RKKSVPLPEPTAPIVANFERAIELC-GYGKFHYILLAICGLVSTSEEMDVISMSFILPSAECDL- 182
            ::||:.:|:.    :.|.|.....| .||      :....|:.:.||.|:.:|.   |:|...| 
  Fly    96 QRKSLSIPKE----LDNDELVYSKCYTYG------VNWTQLLESGEEDDLTTME---PNASWPLI 147

  Fly   183 ------DLNTETKGWLNSII------------FIGMM-------VGAYFWGSIADSFGRKKVLIV 222
                  :.||... |.:.:|            .||:.       ||.|.:|.:.|..||:....|
  Fly   148 KCPQGWEYNTSVV-WSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFV 211

  Fly   223 ISFMNAFCI-------VASSFSQTYSFFMLFRFLNGAALGGSGPVIWSYFAEFQPKAKRGSMLSF 280
                   |:       :.:|.|:.:..:...|.:.|..:.....:.:....|...:..|..:...
  Fly   212 -------CLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVM 269

  Fly   281 MAAFWTFGNLFVASLAWLIIPRTIGFTTPYFTYNSWRIFLLVCSLPSFLVGFLLFYLPESPKFLL 345
            ...|:|.|.:.::.:.:|              ...|.....:.|||.:.....:|.:||||::||
  Fly   270 TCTFYTSGIMLLSGVTYL--------------ERDWVRLSYITSLPFYAYFLYMFVMPESPRWLL 320

  Fly   346 TRGKKDRALAIFRGIFVTNTKRRPDEYMVYDLEVDEKLLESNGNVKNKYSRMIS-GMVDHSRALF 409
            .||:.:.||.|...:...|.:..|:   ...|:::.::  ....:|.:..:|.: |:.|    |.
  Fly   321 MRGRLEEALKILERMAKVNGREFPE---AVHLKLEAQI--RRDKLKKQKKKMANVGLAD----LC 376

  Fly   410 KSPILRFTIVSITI----NFTFHIG--YYGLLMWFPELFNRFEEYEKAFPDQSAGVCAVTDYVVN 468
            ::|.:|...:.||:    |.|.::|  |||     |.|                   ....||  
  Fly   377 RTPNMRLKTILITLSWFANETVYLGLSYYG-----PAL-------------------GTNQYV-- 415

  Fly   469 LAKEQSNNGTCSSDIPQSVFMESLISLASALPANLLAILGMDMLGRKFFLIAGTMTAGICSALMY 533
                             |.|:.:::.    ||:.|.....||..||::.|....:..|:...:..
  Fly   416 -----------------SFFLSAVVE----LPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITV 459

  Fly   534 FVRSSV--QNLVVSAIFSGAISAANAALDCLITEVFPTKLRATGVAISMVAARLGGIIGNIVIAQ 596
            .:....  :.||:..:....:||:...:.....|::||::|..|:..|.....| |:||...|..
  Fly   460 MLPDDAVDETLVLYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGL-GLIGIPFITY 523

  Fly   597 LLDNYCPSPTFIVSGLLIGGGLMCLLLPNTTRKEL 631
            |..:....|..|:..|.:.||:..|.||.|....|
  Fly   524 LGKDNLKLPLVIMGFLSMLGGMTGLRLPETLHHRL 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3168NP_001284957.1 2A0115 149..598 CDD:273327 97/490 (20%)
MFS 154..623 CDD:119392 104/510 (20%)
CarTNP_610052.1 2A0119 44..561 CDD:273328 116/555 (21%)
MFS 182..551 CDD:119392 90/446 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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