DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3168 and Slc22a15

DIOPT Version :9

Sequence 1:NP_001284957.1 Gene:CG3168 / 31612 FlyBaseID:FBgn0029896 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001101177.1 Gene:Slc22a15 / 310732 RGDID:1311184 Length:548 Species:Rattus norvegicus


Alignment Length:490 Identity:124/490 - (25%)
Similarity:191/490 - (38%) Gaps:119/490 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 SMSFILPSAECDLDLNTETK-GWLNSIIFIGMMVGAYFWGSIADSFGRKKVLIVISFMNAFCIVA 233
            |.||...::|..|..|...| ...:|..|.|:.||...:|.::|.||||||.:....::....:|
  Rat    91 SNSFTSIASEWFLIANRSYKVSAASSFFFSGVFVGVISFGQLSDRFGRKKVYLTGFALDILFAIA 155

  Fly   234 SSFSQTYSFFMLFRFLNGAALGGSGPVIWSYFAEFQPKAKRGSMLSFM-------AAFW----TF 287
            :.||.:|.||.:.|||.|...||.                  |:::|:       ||:|    :.
  Rat   156 NGFSPSYEFFAVTRFLVGMMNGGM------------------SLVAFVLLNECVGAAYWALAGSI 202

  Fly   288 GNLF----VASLAWLIIPRTIGFTTPYFTYNSWRIFLLVCSLPSFLVGFLLFYLPESPKFLLTRG 348
            |.||    :|..|.|          .|| ..|||...::.:|...:|..|..::||||::|.::|
  Rat   203 GGLFFAVGIAQYALL----------GYF-IRSWRTLAILVNLQGTVVFLLSLFIPESPRWLYSQG 256

  Fly   349 KKDRALAIFRGIFVTNTKRRPDEYMVYDLEVDEKLLESNGNVKNKYSRMISGMVDHSRALFK-SP 412
            :...|......|...|.|.              |...|..:..|:..|.....:|    ||: ..
  Rat   257 RLSEAEEALYLIAKRNRKL--------------KCTFSLTHPANRSYRETGSFLD----LFRYRV 303

  Fly   413 ILRFTIVSITINFTFHIGYYGLLMWFPELFNRFEEYEKAFPDQSAGVCAVTDYVVNLAKEQSNNG 477
            :|..|::.:.|.|...:.||||.:                   |||                   
  Rat   304 LLGHTLILMFIWFVCSLVYYGLTL-------------------SAG------------------- 330

  Fly   478 TCSSDIPQSVFMESLISLASALPANLLAI--LGMDMLGRKFFLIAGTMTAGICSALMYFVRSSVQ 540
                |:..|::....:|....:|:..|.|  :.....|||..|.|.....|:...::.|:.....
  Rat   331 ----DLGGSIYANLALSGLIEIPSYPLCIYLINQRWFGRKRTLAAFLCLGGLACLIVMFLPEKKD 391

  Fly   541 NLVVSAIFSGA--------ISAANAALDCLITEVFPTKLRATGVAISMVAARLGGIIGNIVIAQL 597
            ..|.:.:.|.:        ||||...:....:|::||.:|..|:....:.:|:||||...| ..|
  Rat   392 TGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGTCSMFSRVGGIIAPFV-PSL 455

  Fly   598 LDNYCPSPTFIVSGLL-IGGGLMCLLLPNTTRKEL 631
            .|.....| |||.|.. :..||:.||||.|....|
  Rat   456 KDVQWSLP-FIVFGATGLTSGLLSLLLPETLNSPL 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3168NP_001284957.1 2A0115 149..598 CDD:273327 109/454 (24%)
MFS 154..623 CDD:119392 119/480 (25%)
Slc22a15NP_001101177.1 MFS 111..469 CDD:119392 108/448 (24%)
MFS_1 111..450 CDD:284993 101/427 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.