DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3168 and Slc22a4

DIOPT Version :9

Sequence 1:NP_001284957.1 Gene:CG3168 / 31612 FlyBaseID:FBgn0029896 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_062661.1 Gene:Slc22a4 / 30805 MGIID:1353479 Length:553 Species:Mus musculus


Alignment Length:552 Identity:125/552 - (22%)
Similarity:210/552 - (38%) Gaps:147/552 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 RKKSVPLPEPTAPIVANFERAIELCGYGKFHYILLAICGLVSTSE-EMDVISMSFILPSAECDLD 183
            |..|:||.......|....|...|.....|     :..||....: :::.:.....|...|.|.|
Mouse    63 RNHSIPLETKDGRQVPQSCRRYRLATIANF-----SAMGLEPGQDVDLEQLEQESCLDGWEYDKD 122

  Fly   184 --LNTETKGW------------LNSIIFIGMMVGAYFWGSIADSFGRKKVLIVISFMNAFCIVAS 234
              |:|....|            ..|:.|:|::.|::..|.::|.|||||||.           |:
Mouse   123 IFLSTIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDRFGRKKVLF-----------AT 176

  Fly   235 SFSQT-YSFFMLFRFLNGAALGGSGPVIWSYFAEFQPKAKRGSMLSFMAAFWTFGNLFVASLAWL 298
            ...|| :||..:|            ...|..|.........|.:.:::.||.....:...|:.  
Mouse   177 MAVQTGFSFVQIF------------STNWEMFTVLFAIVGMGQISNYVVAFILGTEILSKSVR-- 227

  Fly   299 IIPRTIGFTT---------PYFTY--NSWRIFLLVCSLPSFLVGFLLFYLPESPKFLLTRGKKDR 352
            ||..|:|..|         |.|.|  ..||:.||..:||......|.:::||||::|:::.:...
Mouse   228 IIFSTLGVCTFFAIGYMVLPLFAYFIRDWRMLLLALTLPGLFCVPLWWFIPESPRWLISQRRFAE 292

  Fly   353 ALAIFRGIFVTNTKRRPDEYMVYD-LEVDEKLLESNGNVKNKYSRMISGMVDHSRALFKS-PILR 415
            |..|.:.....|:...|..  ::| ||:.|  |.|     .|..::|  ::|    ||:: .|..
Mouse   293 AEQIIQKAAKMNSIVAPAG--IFDPLELQE--LNS-----LKQQKVI--ILD----LFRTRNIAT 342

  Fly   416 FTIVSITINFTFHIGYYGLLMWFPELFNRFEEYEKAFPDQSAGVCAVTDYVVNLAKEQSNNGTCS 480
            .|::::.:.....:||:.|.:..|.|                                      .
Mouse   343 ITVMAVMLWMLTSVGYFALSLNVPNL--------------------------------------H 369

  Fly   481 SDIPQSVFMESLISLASALPANLLAILGMDMLGRKFFLIAGTMTAGICSALMYFVRSSVQNLV-V 544
            .|:..:.|:..||.    :||...|.|.:..|.|: ::|||.:..|....|:..|.....|.| :
Mouse   370 GDVYLNCFLSGLIE----VPAYFTAWLLLRTLPRR-YIIAGVLFWGGGVLLLIQVVPEDYNFVSI 429

  Fly   545 SAIFSG--AISAANAALDCLITEVFPTKLRATGVAISMVAARLGGIIGNIVIAQLLDNYCPSPTF 607
            ..:..|  .|::|.:.|.....|::||.:|...|.|:.:|:|:|.||              :|.|
Mouse   430 GLVMLGKFGITSAFSMLYVFTAELYPTLVRNMAVGITSMASRVGSII--------------APYF 480

  Fly   608 IVSG--------LLIGG-----GLMCLLLPNT 626
            :..|        :|:|.     |::.|..|.:
Mouse   481 VYLGAYNRLLPYILMGSLTVLIGIITLFFPES 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3168NP_001284957.1 2A0115 149..598 CDD:273327 110/480 (23%)
MFS 154..623 CDD:119392 116/513 (23%)
Slc22a4NP_062661.1 2A0119 12..519 CDD:273328 125/552 (23%)
MFS 123..510 CDD:119392 110/483 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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