DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3168 and svop-1

DIOPT Version :9

Sequence 1:NP_001284957.1 Gene:CG3168 / 31612 FlyBaseID:FBgn0029896 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_498960.2 Gene:svop-1 / 176250 WormBaseID:WBGene00014021 Length:520 Species:Caenorhabditis elegans


Alignment Length:519 Identity:137/519 - (26%)
Similarity:219/519 - (42%) Gaps:74/519 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 LPEPTAPIVANFER------AIELCGYGKFHYILLAICGLVSTSEEMDVISMSFILPSAECDLDL 184
            |.|||.....:.|:      |:|..|:|:|...|..:.|:...::.|:::.:|.|.|:..|:..:
 Worm    52 LGEPTDQRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGI 116

  Fly   185 NTETKGWLNSIIFIGMMVGAYFWGSIADSFGRKKVLIVISFMNAFCIVASSFSQTYSFFMLFRFL 249
            ::..:..:.:.:|.|||:.:.|||.|.|.|||:|.|...:.:.....|.|..|..:...:.||.|
 Worm   117 SSVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYVLLFFRGL 181

  Fly   250 NGAALGGSGPVIWSYFAEFQPKAKRGSMLSFMAAFWTFGNLFVASLAWLIIPRTIGFTTPYFTYN 314
            .|..:||. |...:.:|||.|.|:|...:..:.:||..|.:|.|.||             ||...
 Worm   182 TGFGIGGV-PQSVTLYAEFLPTAQRAKCVVLIESFWAIGAVFEALLA-------------YFVME 232

  Fly   315 S--WRIFLLVCSLPSFLVGFLLFYLPESPKFLLTRGKKDRALAIFRGIFVTNTKRRPDEYMVYDL 377
            |  ||..:.:.|||..:.....|:||||.:|.:..|..:|||...:.....|..:.|...:|...
 Worm   233 SFGWRALMFLSSLPLGIFAVASFWLPESARFDMASGHPERALETLQAAARMNRVQLPTGRLVSST 297

  Fly   378 EVDEKLLESNGNVKNKYSRMISGMVDHSRALFKSPILRFTIVSITINFTFHIGYYGLLMWFPELF 442
            :...   ||.|::.|..          |..|.|:.||.:.|.:||.     ..|||::::...||
 Worm   298 KAGS---ESRGDIANLL----------SPDLRKTTILLWCIWAITA-----FSYYGMVLFTTVLF 344

  Fly   443 NRFEEYEKAFPDQSAGVCAVTDYVVNLAKEQSNNGT----CSSDIPQSVFMESLISLASALPANL 503
            ...:|.....                     .:|||    | ..:.:|.:.:.|.:..:..|..:
 Worm   345 QSHDECHGGL---------------------FSNGTQMEVC-QPLTRSDYFDLLSTTLAEFPGLI 387

  Fly   504 LAILGMDMLGRKFFLIAGTMTAGICSALMYFV--RSSVQNL--VVSAIFSGAISAANAALDCLIT 564
            :.:|.::..|||..:........|.:.|:||.  |.:|..|  |..|..|||...|..    ...
 Worm   388 ITVLIIEWFGRKKTMALEYAVFAIFTFLLYFCLDRFTVTVLIFVARAFISGAFQCAYV----YTP 448

  Fly   565 EVFPTKLRATGVAISMVAARLGGIIGNIVIAQLLDNYCPSPTFIVSGLLIGGGLMCLLLPNTTR 628
            ||:||.|||.|:......||:|.|:...:.....:.....|..|.....|.|.:..|.||..|:
 Worm   449 EVYPTTLRAVGLGTCSAMARIGAIVTPFIAQVASEKSLSLPIGIYGTAAILGLIASLSLPIETK 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3168NP_001284957.1 2A0115 149..598 CDD:273327 120/458 (26%)
MFS 154..623 CDD:119392 123/478 (26%)
svop-1NP_498960.2 2A0119 16..514 CDD:273328 137/519 (26%)
MFS 87..508 CDD:119392 123/478 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59613
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.050

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