DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3168 and sv2ba

DIOPT Version :9

Sequence 1:NP_001284957.1 Gene:CG3168 / 31612 FlyBaseID:FBgn0029896 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001076464.1 Gene:sv2ba / 100009626 ZFINID:ZDB-GENE-070209-134 Length:689 Species:Danio rerio


Alignment Length:708 Identity:194/708 - (27%)
Similarity:302/708 - (42%) Gaps:132/708 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 QPNYNQSAASNQASNHPT-GQANAPATGNATSHIDNRAIIQPYSLGTGPKQPEYQFAAD-NRGY- 82
            |.|.||     |...:|| |:.     |..|         .||.... |:|.|...|:| ..|: 
Zfish     6 QNNINQ-----QGEAYPTYGEG-----GEYT---------YPYQTDY-PRQEEDDAASDATEGHD 50

  Fly    83 EPDSHANGKQQDVERDAPDGGHGGHGPPGKGGKGGKGRKK---SVPLPEPTAPIVANFERAIELC 144
            |.|....|:.|.|.       |.......:.....:.|.|   :..:.|.|.|  ..:|..:|.|
Zfish    51 EDDQMYEGEYQGVP-------HPDEIKEARRAARREARMKARMAAEVEEETLP--DQYESIMEDC 106

  Fly   145 GYGKFHYILLAICGLVSTSEEMDVISMSFILPSAECDLDLNTETKGWLNSIIFIGMMVGAYFWGS 209
            |:|:|.:.|..:.||...::.::...:||.|||||.|:.|:...||.|..|:::|||:||..||.
Zfish   107 GHGRFQWTLFTLLGLALMADGVECFVVSFALPSAEKDMCLSNADKGMLGLIVYVGMMIGAVVWGG 171

  Fly   210 IADSFGRKKVLIVISFMNAFCIVASSFSQTYSFFMLFRFLNGAALGGSGPVIWSYFAEFQPKAKR 274
            :||..|||:.|:....:|......|.|:|.|.||:.||..:|..:|||.||:::|:|||....||
Zfish   172 LADKLGRKQCLLYALAINCIFSFLSCFAQGYGFFIFFRLCSGIGIGGSIPVVYTYYAEFLQMDKR 236

  Fly   275 GSMLSFMAAFWTFGNLFVASLAWLIIPR-TIGFTT-PYFTYNSWRIFLLVCSLPSFLVGFLLFYL 337
            |..||::..||..|.|:.:..||.|||. ..||:. ..|.::|||:|:|||.|||......|.::
Zfish   237 GEHLSWLCLFWMLGGLYASFTAWGIIPHYGWGFSMGTEFQFHSWRVFVLVCFLPSVAALAGLVFM 301

  Fly   338 PESPKFLLTRGKKDRALAIFRGIFVTN--TKRRPDE-YMVYDLEV----DEKLLESNGNVKNKYS 395
            ||||:|||...:.|.|..|.|.:..||  .|..|:. :.|..::.    |::.:|........:.
Zfish   302 PESPRFLLESARHDEAWMILRRVHDTNWGAKGEPERVFQVSQIKTPQTQDDEFIEIQSETGTAFQ 366

  Fly   396 RMISGMVDHSRALFK------SPILRFTIVSITIN-FTFHIGYYGLLMWFPE--LFNRFEEYEK- 450
            |.:...:...:.:.|      :|.:|...:.|.|. ||....||||..|||:  .:.:|||||. 
Zfish   367 RFMVRQMTLVKQVMKNMLSLAAPDVRLHGLFIAIVWFTMAFSYYGLGTWFPDQIKYLQFEEYESN 431

  Fly   451 -----------------------------------------AFPDQSAGVCAVTD---------- 464
                                                     .|.|.....|...|          
Zfish   432 VKIFHRERVERFHFNFTLQNQLHKEGEYVHDRFINIEIRNVKFEDSLFENCYFEDIKSTETFFEN 496

  Fly   465 --------YVVNLAKEQS------NNGT-------CSSDIPQS----VFMESLISLASALPANLL 504
                    |..:|.::..      .|.|       |..:..:.    ::::|.:...|.:|.|:|
Zfish   497 CTLKNTVFYNTDLWEDSKFINCNLENTTFLHPKKGCHLNFQEENDILIYLDSFLGSLSVIPGNIL 561

  Fly   505 AILGMDMLGRKFFLIAGTMT-AGICSALMYFVRSSVQNLVVSAIFSGAISAANAALDCLITEVFP 568
            |.|.||.:|| ..:|.|:|. :.:|:..:....|....::...:|..|.:||...::.:..|::|
Zfish   562 AGLLMDKIGR-LKIIGGSMLGSAVCTFFLLLCFSQWAVVLFQCLFFAAGAAAWNGIEVVTVELYP 625

  Fly   569 TKLRATGVAISMVAARLGGIIGNIVIAQLLDNYCPSPTFIVSGLLIGGGLMCLLLPNT 626
            ...|||...:.....:|..||.:.:..:.:......|..:....|:.|||:...||.|
Zfish   626 ASKRATAFGVLNGTCKLAAIISSFIFGKFIGITKIIPIILSFSALVCGGLLAFKLPET 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3168NP_001284957.1 2A0115 149..598 CDD:273327 152/544 (28%)
MFS 154..623 CDD:119392 155/564 (27%)
sv2baNP_001076464.1 synapt_SV2 36..689 CDD:130366 181/658 (28%)
MFS 116..678 CDD:119392 155/562 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59613
OrthoDB 1 1.010 - - D208328at33208
OrthoFinder 1 1.000 - - FOG0001322
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102121
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X658
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.830

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