DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3184 and dph7

DIOPT Version :9

Sequence 1:NP_572341.1 Gene:CG3184 / 31608 FlyBaseID:FBgn0029892 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_001076308.1 Gene:dph7 / 564032 ZFINID:ZDB-GENE-070410-57 Length:443 Species:Danio rerio


Alignment Length:441 Identity:145/441 - (32%)
Similarity:207/441 - (46%) Gaps:107/441 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TLHSEDTEYSADSVEWLTHDDAATGFFACGTY-QLVQEEDEPAAETSAKRPRKGRVYLYQFEEEN 67
            ||...|||.:||:|||......| ...||||| ||::.:|:...|.||...|.||:||:....::
Zfish     9 TLQVFDTELTADTVEWCPIPQWA-HVLACGTYQQLLEGDDKQRTEGSAAPSRIGRLYLFDCNPQS 72

  Fly    68 CRLERL---QCIETSAILDMKWLPAWSSECNPHLATVNSLGQMELYEFLQDAKLLQRRTCFSLAE 129
            ..:..|   |.|:|:||||:||.....|| .|.|....:.|:::||:.::             |:
Zfish    73 SFIPPLTESQRIDTAAILDLKWCHVPISE-RPLLGMATASGEIQLYKLIE-------------AQ 123

  Fly   130 QDSS--------EEAP--LALALDW---QHDGQHIRLAISDSKGGLNLLSYSSQGEIIRERSWLS 181
            |.||        :..|  |||:|||   :.:...:|:..|||.|.|.|||. .:.::.....|.:
Zfish   124 QGSSGLECELSTDLGPDRLALSLDWSTGRGESSDVRVVSSDSTGSLTLLSL-GEADLTAVCQWKA 187

  Fly   182 HGFEAWTCAFDRWSPHILYSGGDDMLLMAHDLR--TKQRAWTNRAHMAGVTCLLSHPRHENHLLT 244
            |.:|||..||..|....:||||||..|...|||  .....:|::.|..||..:.|:|..|:.|.|
Zfish   188 HEYEAWISAFSYWDTQTVYSGGDDSKLKGWDLRMGCSSPTFTSKRHTMGVCSIHSNPHREHILAT 252

  Fly   245 GSYDEQLRLFDTRSMKRSLAELDLSGGIWRLKPHPAQPDLILAACMYTNFSVVQLDVAAPG---- 305
            |||||.:.|:|.|:||:.|:|..:.||:||||.||:|..|:|||||:.:|.::....|..|    
Zfish   253 GSYDENVLLWDGRNMKQPLSETAVGGGVWRLKWHPSQEHLLLAACMHNDFQILYCQKALEGQETP 317

  Fly   306 LSLLGAYEEHKSICYGADW---------------------------------------------- 324
            ..:||:|..|.|:.|||||                                              
Zfish   318 CPVLGSYILHNSLAYGADWSRLPVSSSAPPSPQEPPQTSSGLVESTGHLRIQYESPTASFDTSLE 382

  Fly   325 ------------APWRN----------KDDASLTMATCSFYDHTLCVSRVD 353
                        :|.::          :|..|..:||||||||.:.|.|.|
Zfish   383 DDSGRYIPDQCPSPEKSSVSDLFTSDARDSVSCLIATCSFYDHMMHVWRWD 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3184NP_572341.1 WD40 92..>267 CDD:225201 66/189 (35%)
WD40 repeat 141..181 CDD:293791 13/42 (31%)
WD40 <169..349 CDD:295369 78/253 (31%)
WD40 repeat 187..222 CDD:293791 14/36 (39%)
WD40 repeat 229..267 CDD:293791 18/37 (49%)
WD40 repeat 272..313 CDD:293791 18/44 (41%)
WD40 repeat 319..349 CDD:293791 16/97 (16%)
dph7NP_001076308.1 WD40 <54..>304 CDD:225201 99/264 (38%)
WD40 repeat 90..139 CDD:293791 15/62 (24%)
WD40 repeat 144..186 CDD:293791 13/42 (31%)
WD40 192..>313 CDD:295369 53/120 (44%)
WD40 repeat 194..229 CDD:293791 13/34 (38%)
WD40 repeat 237..275 CDD:293791 18/37 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578468
Domainoid 1 1.000 205 1.000 Domainoid score I2876
eggNOG 1 0.900 - - E1_KOG0280
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5432
Inparanoid 1 1.050 206 1.000 Inparanoid score I3695
OMA 1 1.010 - - QHG54672
OrthoDB 1 1.010 - - D472352at33208
OrthoFinder 1 1.000 - - FOG0005135
OrthoInspector 1 1.000 - - oto41558
orthoMCL 1 0.900 - - OOG6_103086
Panther 1 1.100 - - LDO PTHR46042
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1670
SonicParanoid 1 1.000 - - X3653
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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