DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3184 and SPCC18.15

DIOPT Version :9

Sequence 1:NP_572341.1 Gene:CG3184 / 31608 FlyBaseID:FBgn0029892 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_588394.2 Gene:SPCC18.15 / 2539212 PomBaseID:SPCC18.15 Length:326 Species:Schizosaccharomyces pombe


Alignment Length:353 Identity:108/353 - (30%)
Similarity:169/353 - (47%) Gaps:56/353 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SADSVEW----LTHDDAATGFFACGTYQLVQEEDEPAAETSAKRPRKGRVYLYQFEEENCRLERL 73
            |.|..:|    ..:..........|||.|    ||      :.:.|.|::.||..:|:  .|:|:
pombe    10 STDYTDWPADVCKYSQVFEDVLVVGTYML----DE------STKLRHGKLVLYDTKED--VLKRV 62

  Fly    74 QCIETSAILDMKWLPAWSSECNPH----LATVNSLGQMELYEFLQDAKLLQRRTCFSLAEQDSSE 134
            ..:...||||.||        :||    ||..:|.|.:..|.....|:|:..|   .:...||| 
pombe    63 FDMHCDAILDFKW--------SPHDASVLAVAHSTGHVSFYRHQFRAELMFLR---GIKVADSS- 115

  Fly   135 EAPLALALDWQHDGQHIRLAISDSKGGLNLLSYSSQGEIIRERSWLSHGFEAWTCAFDRWSPHIL 199
              .|.|:||:...|:  .||:|.|.|.:.::...| |.|  :..|..|.:|||||.:.|...::|
pombe   116 --VLMLSLDFSDSGK--ELAVSMSNGSVLIIDIDS-GVI--KNKWKEHDYEAWTCHYSRQDNNLL 173

  Fly   200 YSGGDDMLLMAHDLRTKQRA-WTN-RAHMAGVTCLLSHPRHENHLLTGSYDEQLRLFDTRSMKRS 262
            ||||||..|:.:|.|..... |.: :.|.:||..:||......::.||.|.:.:...|||::.:.
pombe   174 YSGGDDAALVCYDQRIPNSCIWRDIQVHHSGVVSILSRAPFGPYIATGEYGDFMHTLDTRNIGKP 238

  Fly   263 LAELDLSGGIWRLKPHPAQPDL--ILAACMYTNFSVVQLDVAAPGLSLLGA----YEEHKSICYG 321
            |...:|.||:|||:......:.  :|...|:....|:::   :...|.:.|    ::||:|:|||
pombe   239 LFSANLGGGVWRLEHMETTENYHKVLGILMHRGAQVLRI---SNDFSSIDASKRIFKEHESMCYG 300

  Fly   322 ADWAPWRNKDDASLTMATCSFYDHTLCV 349
            .|   ||:.|.   .:|||||||..:|:
pombe   301 GD---WRHTDG---LLATCSFYDKRVCL 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3184NP_572341.1 WD40 92..>267 CDD:225201 57/180 (32%)
WD40 repeat 141..181 CDD:293791 12/39 (31%)
WD40 <169..349 CDD:295369 62/187 (33%)
WD40 repeat 187..222 CDD:293791 15/35 (43%)
WD40 repeat 229..267 CDD:293791 10/37 (27%)
WD40 repeat 272..313 CDD:293791 8/46 (17%)
WD40 repeat 319..349 CDD:293791 14/29 (48%)
SPCC18.15NP_588394.2 WD40 <41..324 CDD:225201 99/312 (32%)
WD40 <45..222 CDD:295369 64/197 (32%)
WD40 repeat 71..111 CDD:293791 14/50 (28%)
WD40 repeat 116..153 CDD:293791 13/41 (32%)
WD40 repeat 161..197 CDD:293791 15/35 (43%)
WD40 repeat 206..259 CDD:293791 15/52 (29%)
WD40 repeat 298..323 CDD:293791 15/31 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0280
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I1403
OMA 1 1.010 - - QHG54672
OrthoFinder 1 1.000 - - FOG0005135
OrthoInspector 1 1.000 - - oto102125
orthoMCL 1 0.900 - - OOG6_103086
Panther 1 1.100 - - LDO PTHR46042
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1670
SonicParanoid 1 1.000 - - X3653
TreeFam 1 0.960 - -
1211.860

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