DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3184 and wdr-23

DIOPT Version :9

Sequence 1:NP_572341.1 Gene:CG3184 / 31608 FlyBaseID:FBgn0029892 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_492124.1 Gene:wdr-23 / 172518 WormBaseID:WBGene00008419 Length:571 Species:Caenorhabditis elegans


Alignment Length:496 Identity:89/496 - (17%)
Similarity:148/496 - (29%) Gaps:224/496 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 HS--EDTEYSADSVEWLTHDDAATGFFACGTYQLVQEEDEPAAETSAKRPRKGRVYLYQFEEENC 68
            ||  .||::|:|       |:        |..::...|::...|........||.::  .:.|:|
 Worm    56 HSNDSDTDFSSD-------DE--------GCPKMTPHEEQQMFEREQHIAFSGRCHI--GDPESC 103

  Fly    69 RLERLQCIETSAILDMKWLPAWSSECNPHLATVNSLGQMELYEFLQDAKLLQRRTCFS------- 126
            ...|.:.               :|.|.|..:|.|::      ||:.:..|.:|.|..|       
 Worm   104 TQLRNEI---------------NSRCGPRPSTSNNM------EFILNRDLQKRGTSISNPRTVAR 147

  Fly   127 -----LAEQDSSEE--APLALALDWQHDGQHIRLAISDSK------------------------- 159
                 |..|....:  |..:....:..:|..|.:|..|.|                         
 Worm   148 VLNSHLPNQKRRVDRVATKSFCTQYIQNGTKIVVASQDEKIRFYQRNPDKSKYRSKYMKSDELRV 212

  Fly   160 --GGLNLL--SYSSQGEIIRERSW---------------------------------------LS 181
              .|.::|  :.|..|::|...:|                                       .|
 Worm   213 DQCGWSILDTAISLNGDLIAYGTWKDAVFVGKLDFTERQNITWFPIDLNGEPGRDHCAVFCVKFS 277

  Fly   182 HGFEAWTCAFDRWSPHI--------------------------------LYSGGDDMLLMAHDLR 214
            ...|...|...::|.|:                                :||.|||.|:...|  
 Worm   278 DSSEQIVCGTSQYSIHVFDVEQRRRIRTIVNAHEDDVNSVCFADLGSNLIYSAGDDGLVKVWD-- 340

  Fly   215 TKQRAWTN---------RAHMAGVTCLLSHPRHENHLLTGSYDEQLRLFDTRSMKRSLAELDLSG 270
              :|||::         ..|..|||.:.|. :.|.:||:.|.|:.::::|.|...      ::||
 Worm   341 --KRAWSDGDVEPVGVFAGHRDGVTHVDSR-QDERYLLSNSKDQTIKVWDLRKFS------NMSG 396

  Fly   271 ----------GIWRLKPHPAQPDL-----------------ILAACMYTNFS------------- 295
                      ..|..:..||.|.|                 :|...:..|||             
 Worm   397 VEATRACVQSQHWDYRWQPAPPGLCQPVAGDTSVMTLRGHSVLHTLVRANFSPESTGRRYIYTGC 461

  Fly   296 ----VVQLDVAAPGLS--LLGAYEEHKSICYGADWAPWRNK 330
                ||..|:.:..:|  |.|    |.::....||.|..|:
 Worm   462 ARGEVVVYDIMSGTVSRRLKG----HTAVVRECDWHPTENE 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3184NP_572341.1 WD40 92..>267 CDD:225201 52/297 (18%)
WD40 repeat 141..181 CDD:293791 11/107 (10%)
WD40 <169..349 CDD:295369 52/288 (18%)
WD40 repeat 187..222 CDD:293791 13/66 (20%)
WD40 repeat 229..267 CDD:293791 10/37 (27%)
WD40 repeat 272..313 CDD:293791 15/76 (20%)
WD40 repeat 319..349 CDD:293791 4/12 (33%)
wdr-23NP_492124.1 WD40 119..511 CDD:225201 71/401 (18%)
WD40 repeat 167..205 CDD:293791 5/37 (14%)
WD40 168..514 CDD:295369 60/346 (17%)
WD40 repeat 220..269 CDD:293791 5/48 (10%)
WD40 repeat 271..307 CDD:293791 5/35 (14%)
WD40 repeat 315..356 CDD:293791 10/44 (23%)
WD40 repeat 362..434 CDD:293791 17/78 (22%)
WD40 repeat 442..481 CDD:293791 7/38 (18%)
WD40 repeat 487..511 CDD:293791 4/12 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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