DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pink1 and MAPKKK9

DIOPT Version :9

Sequence 1:NP_001027049.1 Gene:Pink1 / 31607 FlyBaseID:FBgn0029891 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_192588.1 Gene:MAPKKK9 / 826407 AraportID:AT4G08480 Length:773 Species:Arabidopsis thaliana


Alignment Length:688 Identity:140/688 - (20%)
Similarity:230/688 - (33%) Gaps:221/688 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VVPRTINSPSGSPFNGSG---------------SSPTSSSGIFRVGQHARKLFIDNILSR---VT 114
            ::.|:::.|:.:.|...|               |.|..    |.:...|.|..:::..|.   |.
plant   146 LITRSLDFPNRTSFRVDGVDDGEIDRIYQYIGVSGPED----FAISSDAWKARMEHERSSSDVVN 206

  Fly   115 TTYSEDLRQR------------ATRKLFFGDSAPFFALIGVSLASGSGVLSKEDELEGVCWEIRE 167
            ...|.||..|            :....|.|........|||.:|| :..||:.:::|.:      
plant   207 KLKSLDLDSREAGPSGGVVASSSMNHKFQGHDLSEAGSIGVVVAS-NFTLSESNKIENL------ 264

  Fly   168 AASRLQNAWNHDEISD--------TLDSKFTI-----------DDLEIG-------PPIAKGCAA 206
                  |:....||.|        .::.|.||           ||:.:|       ||:..    
plant   265 ------NSLRDKEIVDGDMVENRCGIERKPTILVKSRGYLVHNDDVGVGGGIKGVRPPVLN---- 319

  Fly   207 VVYAADFKKDVASDGASLHTDAQPQATPA--------FAPNSWSTHEMMSPLQNM---------S 254
             |..||  |:|. ||.::.:.:..:..|.        ...|......:.||:.|:         |
plant   320 -VPRAD--KEVV-DGGTVESKSGIEWKPTILVKSKGYLVSNDGGIKGVTSPVLNLRPTDKEVVDS 380

  Fly   255 RFVHNF-------------------------GGSVDNVFHYSQPSAASDFVGAQSREQDQRHHEQ 294
            ..|.|.                         |.|.|.:.|::..|.......:.|..::....|:
plant   381 GTVENRRGIKGVRPSVLKPPPVMKLPPVDLPGSSWDILTHFAPDSEIVRRPSSSSSSENGCDEEE 445

  Fly   295 QQHQNQEQEQ------------------HQNQEPSSSAFNVTSP---ANSNINSSVDSYPLALKM 338
            .:....|:|:                  ..|:..|||..:.|||   :..:||:|.....|..:.
plant   446 AEDDKVEKEETGDMFIQLEDTTDEACSFTTNEGDSSSTVSNTSPICVSGGSINTSWQKGQLLRQG 510

  Fly   339 MFNYDIQSNALSILRAMYKE-------TVPARQRGMNEAADEWERLLQNQTVHLPR--HPNIVCM 394
            .|.        |:..|:.::       .|....:|  ..|.|..:.|:.:...|.:  |.||:..
plant   511 SFG--------SVYEAISEDGDFFAVKEVSLLDQG--SQAQECIQQLEGEIALLSQLEHQNILRY 565

  Fly   395 FGFFCDEVRNFPDGHLLYPVAQPQRINPQGYGRNMSLYLLMKRYDHSLRGLLDSQDLSTRNRILL 459
            .|  .|:     ||..||...:   :..||     ||..|.:||  .:|..|.|         |.
plant   566 RG--TDK-----DGSNLYIFLE---LVTQG-----SLLELYRRY--QIRDSLIS---------LY 604

  Fly   460 LAQMLEAVNHLSRHGVAHRDLKSDNVLIELQDDAAPVLVLSDFGCCLADKVHGLRLPYVSHDVDK 524
            ..|:|:.:.:|...|..|||:|...:|:    ||...:.|:|||.....|::.::        .:
plant   605 TKQILDGLKYLHHKGFIHRDIKCATILV----DANGTVKLADFGLAKVSKLNDIK--------SR 657

  Fly   525 GGNAALMAPEIFNTMPGPFAVLNYG---KADLWACGALAYEIFGNRNPFYSSSGGMARERGEMTL 586
            ......||||:.|...      |.|   .||:|:.|....|:...:.|:.......|..|     
plant   658 KETLFWMAPEVINRKD------NDGYRSPADIWSLGCTVLEMCTGQIPYSDLEPVEALFR----- 711

  Fly   587 SLRNSDYRQDQLPPMSDACPPLLQQLVYNILNPNPSKR 624
                  .|:..||.:.|......:..:...|..||.:|
plant   712 ------IRRGTLPEVPDTLSLDARHFILKCLKLNPEER 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pink1NP_001027049.1 STKc_PINK1 328..639 CDD:270920 70/309 (23%)
MAPKKK9NP_192588.1 PKc_like 500..755 CDD:304357 70/309 (23%)
S_TKc 501..755 CDD:214567 69/308 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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