DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pink1 and Pink1

DIOPT Version :9

Sequence 1:NP_001027049.1 Gene:Pink1 / 31607 FlyBaseID:FBgn0029891 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_036020293.1 Gene:Pink1 / 68943 MGIID:1916193 Length:592 Species:Mus musculus


Alignment Length:599 Identity:194/599 - (32%)
Similarity:269/599 - (44%) Gaps:150/599 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 VSLASGSGV-LSKEDELEGVCWEIREAASRLQN-----AWNHDEISDTLDSK----FTIDDLEIG 197
            |.||.|.|: |.:|.:.||     |.|||..|.     ......:||.||::    |.::|..||
Mouse   100 VFLAFGLGLGLIEEKQAEG-----RRAASACQEIQAIFTQKTKRVSDPLDTRCWQGFRLEDYLIG 159

  Fly   198 PPIAKGCAAVVYAADFKKDVASDGASLHTDAQPQATPAFAPNSWSTHEMMSPLQNMSRFVH--NF 260
            ..|.|||.|.||                     :||....|            |::.:..|  ..
Mouse   160 QAIGKGCNAAVY---------------------EATMPTLP------------QHLEKAKHLGLI 191

  Fly   261 GGSVDNVFHYSQPSAASDFVGAQSREQDQRHHEQQQHQNQEQEQHQNQEPSSSAFNVTSPANSNI 325
            |...|.|..           ||..                      .|.|.:..|          
Mouse   192 GKGPDVVLK-----------GADG----------------------EQAPGTPTF---------- 213

  Fly   326 NSSVDSYPLALKMMFNYDIQSNALSILRAMYKETVPARQRGMNEAADEWERLLQNQTVHLPR--- 387
                   |.|:|||:|....|::.:||..|.:|.|||.:..:   |.|:..:...::...|:   
Mouse   214 -------PFAIKMMWNISAGSSSEAILSKMSQELVPASRVAL---AGEYGAVTYRRSRDGPKQLA 268

  Fly   388 -HPNIVCMFGFFCDEVRNFPDGHLLYPVAQPQRINPQGYGRNMSLYLLMKRYDHSLRGLLDSQDL 451
             ||||:.:|..|...|...|.....||...|....|:|.|...:|:|:||.|..:||..|:.|..
Mouse   269 PHPNIIRVFRAFTSSVPLLPGALADYPDMLPPHYYPEGLGHGRTLFLVMKNYPCTLRQYLEEQTP 333

  Fly   452 STRNRILLLAQMLEAVNHLSRHGVAHRDLKSDNVLIE-----LQD-------DAAPVLVLSDFGC 504
            |:|...::..|:||.|:||.:.|:|||||||||:|:|     ||:       |..|.||:|||||
Mouse   334 SSRLATMMTLQLLEGVDHLVQQGIAHRDLKSDNILVEWDSALLQERTPLHLMDGCPWLVISDFGC 398

  Fly   505 CLADKVHGLRLPYVSHDVDKGGNAALMAPEIFNTMPGPFAVLNYGKADLWACGALAYEIFGNRNP 569
            ||||:..|||||:.|..|::|||.:|||||:.....||.||::|.|||.||.||:||||||..||
Mouse   399 CLADQHVGLRLPFNSSSVERGGNGSLMAPEVSTAHSGPSAVIDYSKADTWAVGAIAYEIFGLANP 463

  Fly   570 FYSSSGGMARERGEMTLSLRNSDYRQDQLPPMSDACPPLLQQLVYNILNPNPSKRVSPDIAANVV 634
            ||          |:.:..|.:..|::.|||.|.::.||..::||.::|....|||.|..:||||:
Mouse   464 FY----------GQGSAHLESRSYQEAQLPEMPESVPPEARRLVRSLLQREASKRPSARLAANVL 518

  Fly   635 QLFLW-----APSNWLKAGGMPNSPEILQWLLSLTTKIMCEGRPQMGAGLMPVASCGNRRAYVEY 694
            .|.||     |..| ||...|      :.|||..:...:...|       :...||...:..:.:
Mouse   519 HLSLWGEHLLALKN-LKLDKM------IAWLLQQSAATLLADR-------LREKSCVETKLQMLF 569

  Fly   695 L--LICSFLARARL 706
            |  |.|..|.:|.|
Mouse   570 LANLECEALCQAAL 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pink1NP_001027049.1 STKc_PINK1 328..639 CDD:270920 133/326 (41%)
Pink1XP_036020293.1 STKc_PINK1 162..523 CDD:270920 123/378 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836985
Domainoid 1 1.000 211 1.000 Domainoid score I2799
eggNOG 1 0.900 - - E1_KOG4158
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 277 1.000 Inparanoid score I2917
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0008271
OrthoInspector 1 1.000 - - oto93126
orthoMCL 1 0.900 - - OOG6_109238
Panther 1 1.100 - - LDO PTHR22972
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X7349
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.750

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